Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03253 ATGGCTGGTCCTCCAACAGTTTCTTATCTTTTGCTCTTATTCCTTCTCTTTGGCTTCTCTTCAGCTAGGGAAATCTTGGTTGGAGGCAAGCCAGATTCATGGAAGATTCCATCTTCTGAATCAGGCTCACTTAATCAATGGGCAGAAAGGTCTCGCTTTCTAATTGGCGACTATCTTGTTTGGAAATATGATGGTGGGAAAGATTCAGTTTTGCAAGTCAGCAAGGAGGGTTATGCTAATTGCAGCACCTCAAACCCAATCAAAGAGTACAATGATGGGAACACAAAGGTGAAGCTTGACCGTCCTGGGCCATTCTACTTCATCAGTGGGGCAAAGGGTCACTGTGAGAAGGGTCAGAAGCTTATTGTGGTGGTTTTGACCCCAAGGGGTAGCACTTACACTGCTAGTCCTCCTGCTTTCGCTCCTGCTACTGCTCCTTCTCCAGCAGGGTTTGAAGGTCCAGCTGTAGCTCCAAGCCCAACTAGCACTGCCACAGCTTTGCAGGGTGGGTTTGTGATGGGTTTGGGAGTAGTTTGCTATGTGGGTTTTTTGATTTGA 558 0.4713 MAGPPTVSYLLLLFLLFGFSSAREILVGGKPDSWKIPSSESGSLNQWAERSRFLIGDYLVWKYDGGKDSVLQVSKEGYANCSTSNPIKEYNDGNTKVKLDRPGPFYFISGAKGHCEKGQKLIVVVLTPRGSTYTASPPAFAPATAPSPAGFEGPAVAPSPTSTATALQGGFVMGLGVVCYVGFLI. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03253 185 PANTHER BLUE COPPER PROTEIN 24 141 IPR039391 GO:0009055
Seca7g03253 185 ProSiteProfiles Phytocyanin domain profile. 23 127 IPR003245 GO:0009055
Seca7g03253 185 CDD OsENODL1_like 23 126 IPR041846 -
Seca7g03253 185 FunFam Early nodulin-like protein 1 22 130 - -
Seca7g03253 185 SUPERFAMILY Cupredoxins 22 126 IPR008972 -
Seca7g03253 185 Gene3D - 21 129 IPR008972 -
Seca7g03253 185 Pfam Plastocyanin-like domain 34 119 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03253 Seca-Chr7 95271704 95272742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03253 1 178 Phytocyanin Superfamily AT4G31840 52.778 1.51e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03253 - - gmx:100305551 245.743