Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03246 ATGCTTAAAGAAATTAAACTATGCTTATTTGTTTTAATTCAGATTCAGATAGGAATGGGAACAAATCTCAGCATTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGAGCATCTTAGATATGGCTTATCATCTATGCAAGGGTGGCGTGCAACAATGGAAGATGCTGTAAATACTTTTAATGACACTGGTTTATGGATCAGCAGGCCACTTCTCGCAAATGAACATGCAATTGTGTTTTTGGGAAATTATCTGTTCGTTTTGCATGCTGCACATCTTGATCTGGATGCATCCACTTCGTTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCCAAATATCTTCACCAACAGGTGCTTAGGAGTGAAGCATACACAGCTGGAGATGTTGGAACCTCTCTTCAGAAAGCATTTTTCAGAATGGACGAGATGATGCGTGGCCAAAGGGGATGGAGGGAATTAGCGGTCTTGGGTGATAAGATAAACAAGTTTAATGGAATGGTAGAAGGATTGATTTGGTCCCCACGAAGCAGTGATAGTAAGAAGGACCAAGGTGATGGTTGGGCCTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCAGGAAGTACTGCCTGTGTTGCGATCATTAGAGACAACGAACTTTTTGTAGCAAATGCTGGTGATTCCCGCTGTGTAATATCTAGGAAGGGTCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGACGAATTAATGGGAGTTTAAATCTAGCAAGAGCTATAGGTGACATGGAATTTAAGAAGAATAGATTTCTTTCTGCTGAAAAACAAATAGTGACTGCCAATCCAGATATAAACATTGTTGACCTTTGTGATGAAGATGAATTTTTAGTGCTCGCTTGTGATGGCATATGGGATTGCATGTCAAGCCAACAATTGGTAGATTTTGTACGTCAAGAACTGCTTATGGAAACAAAACTTTCTGCTGTTTGTGAAAGAGTATTAGATCGGTGTTTGGCACCATCAATTGCTGTTGGTGAGGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAAAAACCAGTACAGTCCAATGCACCTGCTCAAGAGCAATCCTCTTCAAATGAACAAGCAAGACTGGAGAGTAGTGCAAGTTAG 1224 0.4052 MLKEIKLCLFVLIQIQIGMGTNLSIPKTEKFSEDGENEHLRYGLSSMQGWRATMEDAVNTFNDTGLWISRPLLANEHAIVFLGNYLFVLHAAHLDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLRSEAYTAGDVGTSLQKAFFRMDEMMRGQRGWRELAVLGDKINKFNGMVEGLIWSPRSSDSKKDQGDGWAFEEGPHSDFAGPTSGSTACVAIIRDNELFVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRINGSLNLARAIGDMEFKKNRFLSAEKQIVTANPDINIVDLCDEDEFLVLACDGIWDCMSSQQLVDFVRQELLMETKLSAVCERVLDRCLAPSIAVGEGCDNMTMILVQFKKPVQSNAPAQEQSSSNEQARLESSAS. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03246 407 ProSitePatterns PPM-type phosphatase domain signature. 102 110 IPR000222 GO:0043169
Seca7g03246 407 PANTHER PROTEIN PHOSPHATASE 2C 35 379 IPR015655 GO:0004722|GO:0006470
Seca7g03246 407 SMART PP2C_4 31 378 IPR001932 -
Seca7g03246 407 SUPERFAMILY PP2C-like 22 381 IPR036457 -
Seca7g03246 407 CDD PP2Cc 41 380 IPR001932 -
Seca7g03246 407 Gene3D - 18 381 IPR036457 -
Seca7g03246 407 ProSiteProfiles PPM-type phosphatase domain profile. 41 380 IPR001932 -
Seca7g03246 407 MobiDBLite consensus disorder prediction 386 407 - -
Seca7g03246 407 Pfam Protein phosphatase 2C 43 153 IPR001932 -
Seca7g03246 407 Pfam Protein phosphatase 2C 207 362 IPR001932 -
Seca7g03246 407 MobiDBLite consensus disorder prediction 182 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03246 Seca-Chr7 95180401 95186643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03246 19 392 PP2C-type Phosphatase Gene Family AT2G25070 71.123 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03246 K17499 - gmx:100793667 596.275