Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03237 ATGGAATCATTCACCGTGACCTTAAACCTGCATTATTCTGATAACTTGGTTCTTCTTTCCTTCCCAGATAACTTGATCTTGACAGCAGATCACAGGACTGTTAAACTTGCTGATTTTGGTCTAGCCAGAGAAGAGTCCTTAACAGAGATGATGACTGCTGAAACAGGAGCATATCGTTGGATTGCTCCAGAACTTTACAGCACTGTTACTCTAAGACAAGGTGAGAAGAAGCATTACAATCATAAGGTGGATGCTTACAGCTTTGCAATTGTGTTGTGGGAGCTCATCCATAATAAGTTGCCCTTTGAAGGCATGTCTAATATACAGGCAACATATGCTGCTACTTTTAAGGTAGATGACATTCAGATGCTTACTTGA 378 0.4048 MESFTVTLNLHYSDNLVLLSFPDNLILTADHRTVKLADFGLAREESLTEMMTAETGAYRWIAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNIQATYAATFKVDDIQMLT. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03237 125 SUPERFAMILY Protein kinase-like (PK-like) 22 112 IPR011009 -
Seca7g03237 125 Pfam Protein kinase domain 22 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03237 125 Gene3D Transferase(Phosphotransferase) domain 1 21 123 - -
Seca7g03237 125 PANTHER SERINE-THREONINE PROTEIN KINASE 22 109 - -
Seca7g03237 125 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03237 Seca-Chr7 94896396 94897414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03237 22 119 MAP Kinase Kinase Kinase AT5G40540 88.776 6.47e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Seca7g03237 Pkinase 1.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03237 - - csin:114263364 190.66