Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03236 ATGTTGGGTCCTCTTCCAGCCTGTTCCCACTCCCTCCTCCACATCCTTCTTCTTTTGCTCACCCTTTCTTCCCTCCCAAAAACCCAATCACTATTCTTCAACATAACCAACTTCGATGACTCTAGTGTTGCAAGCAGCATGCAATACGAGGGTGATGGAAGAGCCAGCAACGGTTCCATAGACCTTAACAAAGTGAGTTACCTTTTCCGTGTAGGAAGAGCCATCTATGGTGAACCACTTCACTTATGGGACTCATCTTCGAGGATTCTCACCGACTTCACCACGCGCTTCACCTTCACAATTGATAAGGTAAACGACACGTCGTACGGTGATGGCTTTGTGTTCTATTTAGCCCCTGTAGGTTACCAAATTCCGCCAAACTCAGCTGGTGGCGTTTTTGGATTACTAAACGCCACCACTAACAACGACCCTCAAAACCATGTGTTTGCCGTCGAGTTTGACACCTTTGTGGGCTCCATTGACCCACCAATGAAGCATGTCGGAATAGACGACAATTCTCTCACGTCCGTCGCTTTTGCCAAGTTCGACATTGATAGAAACCTTGGTAAACCCTGTCTCGCTTTGATTACTTACACTGCTTCCACCAAAACGCTCGTCGTTTCTTGGTCCTTTGATGGAAGAATCAAAACAAACGATCCCAATTCTTCTATTTCTTACCAAATTGACTTTATGCAAATCCTACCTGAATGGGTGAATATTGGGTTTTCAGCTTCAACTGGGCTTTCAACTGAAAGAAACGTTATCCATTCATGGGAGTTCAGTTCAACTCTGAATTCCACTGGCGTGTTTGGGGGAAAGGGAAAGAGCAAAAAATCTAACACGGTTGTGCTTGTTGTTGCTGTTGTTTGTCCTGCTATTTTGGTGTTCGTTGCTGCGAGTGTTGTGTTGTTAATAATGAGGAAGAGAAGAGAGAATCTTTATGAGGGTGATGATGAGTATGGAGGAGCCATGTCAGAGAAGTTTGATTTGGATAAAGCAACTATACCTAGAAGATTTGATTATGAGGAATTAGTTGAAGCCACCAACGGGTTTGCAGATGATAGAAGATTGGGAAGAGGTGGGTTTGGAGAGGTTTATAAAGGTACTTTGAGTTGTTTAGGAAGGGTTGTTGCTGTGAAGAGGATATTTGCTGATTTTGAGAATTCAGAGAGAGTTTTCACCAATGAGGTTAGGATTATAAGCCGTTTGATACATCGAAACTTGGTTCAATTCATAGGGTGGTGTCATGAGCAAGAAGAGTTTTTGCTTATTTTTGAATACATGCCTAATGGAAGCCTTGACAGTCACCTTTTTGGGGAGAAGAGAACTCTGGCATGGGAGGTGAGGTATAAGGTGGCTTTAGGTGTGGTCAATGCACTTCATTATCTTCATGAAGATGCAGAGCAGTGTGTTCTTCATAGGGATATTAAGTCTGCTAATGTGTTGTTGGACAATGATTTCAGCACCAAGCTTGGGGATTTTGGGATGGCAAAGTTGGTGGATCCAAGATTGAGGACTCAGAGGACAGGGGTGGTTGGGACATATGGGTATTTGGCCCCTGAATATCTCAATGGAGGGAGGGCTAGTAAGGGATCAGATATGTATAGTTTTGGGATTGTGGCTTTGGAGATTGCAAGTGGAAGGAGGACTTATCAGGATGGGGAGTTTCATGTGCCTCTGTTGAATTGGGTGTGGCATCTCTATGTGGAAGGGAATATTCTGTGTGCTGCTGATAAGAGATTGAAGGAGGAGTTTAATGTGAATGAAATGAAAAGCTTGCTCATTGTGGGGTTGTGGTGTACCCACCCAAATGATAAGGAAAGACCCAAAGCAGCACAAGTAATCAAGGTTCTTCAGCTTGAAGCTCCACTACCAGAACTTCCACTTGATATGCATGATCGTCTTCCTCTTCCACCTCCTCCACCACCGATTAGCCAACCCAATTATTCTGCTCAATCACCACCCATCACTAACAGCCTTGTTAGTGTTGGACGTTAG 1998 0.4404 MLGPLPACSHSLLHILLLLLTLSSLPKTQSLFFNITNFDDSSVASSMQYEGDGRASNGSIDLNKVSYLFRVGRAIYGEPLHLWDSSSRILTDFTTRFTFTIDKVNDTSYGDGFVFYLAPVGYQIPPNSAGGVFGLLNATTNNDPQNHVFAVEFDTFVGSIDPPMKHVGIDDNSLTSVAFAKFDIDRNLGKPCLALITYTASTKTLVVSWSFDGRIKTNDPNSSISYQIDFMQILPEWVNIGFSASTGLSTERNVIHSWEFSSTLNSTGVFGGKGKSKKSNTVVLVVAVVCPAILVFVAASVVLLIMRKRRENLYEGDDEYGGAMSEKFDLDKATIPRRFDYEELVEATNGFADDRRLGRGGFGEVYKGTLSCLGRVVAVKRIFADFENSERVFTNEVRIISRLIHRNLVQFIGWCHEQEEFLLIFEYMPNGSLDSHLFGEKRTLAWEVRYKVALGVVNALHYLHEDAEQCVLHRDIKSANVLLDNDFSTKLGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYLNGGRASKGSDMYSFGIVALEIASGRRTYQDGEFHVPLLNWVWHLYVEGNILCAADKRLKEEFNVNEMKSLLIVGLWCTHPNDKERPKAAQVIKVLQLEAPLPELPLDMHDRLPLPPPPPPISQPNYSAQSPPITNSLVSVGR. 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03236 665 MobiDBLite consensus disorder prediction 650 665 - -
Seca7g03236 665 PANTHER - 25 622 - -
Seca7g03236 665 FunFam L-type lectin-domain containing receptor kinase IX.1 428 628 - -
Seca7g03236 665 FunFam L-type lectin-domain containing receptor kinase IX.1 29 278 - -
Seca7g03236 665 Pfam Protein kinase domain 352 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03236 665 SMART serkin_6 351 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03236 665 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Seca7g03236 665 Pfam Legume lectin domain 32 263 IPR001220 GO:0030246
Seca7g03236 665 MobiDBLite consensus disorder prediction 632 649 - -
Seca7g03236 665 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
Seca7g03236 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Seca7g03236 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 264 IPR013320 -
Seca7g03236 665 Gene3D Phosphorylase Kinase; domain 1 324 427 - -
Seca7g03236 665 CDD lectin_legume_LecRK_Arcelin_ConA 33 264 IPR001220 GO:0030246
Seca7g03236 665 FunFam L-type lectin-domain containing receptor kinase IX.1 336 427 - -
Seca7g03236 665 Gene3D - 29 270 - -
Seca7g03236 665 ProSiteProfiles Protein kinase domain profile. 351 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03236 665 SUPERFAMILY Protein kinase-like (PK-like) 335 642 IPR011009 -
Seca7g03236 665 MobiDBLite consensus disorder prediction 630 665 - -
Seca7g03236 665 Gene3D Transferase(Phosphotransferase) domain 1 428 623 - -
Seca7g03236 665 CDD STKc_IRAK 357 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03236 Seca-Chr7 94854306 94856303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03236 16 631 Receptor kinase-like Gene Family AT5G10530 45.382 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca7g03236 Pkinase 7.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03236 - - vun:114193012 914.835