Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03225 ATGGCTGCAAGACATGATGAAAGTGATTCAAACAGCATGGTTTCCATTTCAAGGATTGTGTCTGTGCATCCAAAACTTGTTCAACCTGATCATCAGAGGGTTTTGAACCTTTCAAATTTGGATAGACAGTGTCCCACACTTATGCATTTGGTGTTTTTCTATAACCTCTCATCATCATCATCTCATCACCAACAAACTTTGATGAATGATTTGTCCCTAAATTCAGTGTTCTCCAGCTTGAAATCTGGGTTGGAAGAAACCTTGAATCTGTGGTATCCAGGTGCAGGTAGGCTTACCCCAAACCAAAGTGATGGAAAGCTCAACCTTTGGTGCAACAACAAGGGTGCAGTTCTTGTAGAGGCTGAAACTCCCGCTAAAATATCACAACTTGGTGATCTCTCTCAGTATAATGAATTCTTTGAAAAGCTGGTTTATAAGCCAGCTTTTGATGGGGATTTCTCAAACATGCCTCTGATTGTTGCTCAGGTTACAAAATTTGGTTGTGGAGGGTATTCAATTGGAATTGGAACAAGTCACTCATTATTTGATGGGCCAGCAACCTATAATTTCTTGTATGCATGGGCTTCAAATTCTGAGATTGTGAAAGGAAGGAGATTTGATGAGGTGCCAAAACCAGTGCATGAAAGGGGAATACTACTAAGTGGTAGTCATCATCAACCGACTATGAATTTTCCTTCAAATTCAAACTTAAATATTGTTCAACAAGCAAGAGCCATGGCCATAGACCATCTATATCAACTTATAATGCAAGCAGCTAGTGGACAAAAGGGTTTTCCTCTGCAAATTGGACCCTCTAATCAAAATAAATGTGTTCTTAAAACATATCATCTTTCAAGTGCAATGATAGATGACTTGAAGAGGAAACACTTTCCCTTGCGGAGGGGTTCTCTTCCATTCTCAACCTTTGAGGTCCTTGCAGCTCACCTTTGGAAGGCAAGGACCAAAGCTTTTGGACTGAGGAAAGAAAAGCTGGTATGCCTGCAATTCGCCGTGGACACCAGGAACAGGATGTTACCACCATTACCAAAAGGTTTCAGTGGAAACGCATACGTTCTTGCCTCTGTTATGATGTCAGCAGGGGAACTCGAACAATCAAGCCTTGAAGATATCATTGAGAAAATAAGAGAAGCAAAGAACACTGTGAATCATGACTATGTGAAATCCTACATTGAGGCACTGGAAGGACCACAGGGTTCTCTCCCTCCACTGAAGGAGCTAACACTGGTCTCTGATTGGACAAGAATGCCATTTCATAACATTGAGTTCTTTCATGGAAAAGCAGCCTATGCATGTCCTCTGGCCACTCCAATTCCACAGGTTGCATATTTCATGCAGAGTCCTACTGATAATGGAGGCGTTGATGTGAGAATTGGTTTTGAAGCAGAAACCATAACTGCTTTTACTAACTGCTTTTTAAGCTGA 1443 0.413 MAARHDESDSNSMVSISRIVSVHPKLVQPDHQRVLNLSNLDRQCPTLMHLVFFYNLSSSSSHHQQTLMNDLSLNSVFSSLKSGLEETLNLWYPGAGRLTPNQSDGKLNLWCNNKGAVLVEAETPAKISQLGDLSQYNEFFEKLVYKPAFDGDFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYNFLYAWASNSEIVKGRRFDEVPKPVHERGILLSGSHHQPTMNFPSNSNLNIVQQARAMAIDHLYQLIMQAASGQKGFPLQIGPSNQNKCVLKTYHLSSAMIDDLKRKHFPLRRGSLPFSTFEVLAAHLWKARTKAFGLRKEKLVCLQFAVDTRNRMLPPLPKGFSGNAYVLASVMMSAGELEQSSLEDIIEKIREAKNTVNHDYVKSYIEALEGPQGSLPPLKELTLVSDWTRMPFHNIEFFHGKAAYACPLATPIPQVAYFMQSPTDNGGVDVRIGFEAETITAFTNCFLS. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03225 480 Pfam Transferase family 28 475 - -
Seca7g03225 480 Gene3D - 265 479 IPR023213 -
Seca7g03225 480 Gene3D - 9 235 IPR023213 -
Seca7g03225 480 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03225 Seca-Chr7 94511083 94517241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03225 38 474 Monolignol Biosynthesis Gene Families AT5G48930 25.612 1.20e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03225 K15400 - gmx:100803347 738.413