LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g03210	ATGGATACTGGGTTAGAAAATATGTCAGGTGAACATGTAGAACAACCAAATTCAGAGGATCATGTAGAAGAATTAATTTCAGAGGATCATGTACAAGAAAATATGCCAGAGGCAGAGGTTCGCAGGATAATAGATTTGTCTAGTAAAGACATAAAGGGTTTGGAGTTTGGAAGTGAAGAAGATGCTTATAATTTCTATTTTTCATATGCCAGATGTCATGGCTTAGCTATGAGGAAAAATGATGAAATTCGGGATGTCAAAGGCAATGTTATTATGCGTCAGTATTTATGTAGAAAAGTTGGGTTGAGGGACAAAAGGCACGTTTTGAGGGTAGATCGTAAAAAAGAACATAGGCCTTTAACTCGTGTTAACTGTGAAGCAAAGTTACGAGTTAGGTATGATTATAAGACTGGGAAATTCAAGGTGGTTTCATTTATTGAGTGTCACAACCATGAGTTAACTCCAGCAAAATTTGTCCCTTTAATTCCTTCATATCGTGGCTTGTCTGAAGGGGGTAAAGCTCAAGTGGATGCACTACATTCTCATGGTGTTAGGCCATGTCAAATAATGGGTTACCTATTGGATCAAAAGGGAGGTTATGCCAATGTAGGATTTTGTAAAAAGGATTTATACAACTACATAGATGAGGTGAAGCGTGGTAAGATTAAAGATGGTGATGCAATGGCTGGATTAAATTATTTGCAAGGAAAAGCAGACAATGAACCAATTTTTTCTCTAGGTTTCTATGTTCTGATGATGGTAAATTGA	768	0.3685	MDTGLENMSGEHVEQPNSEDHVEELISEDHVQENMPEAEVRRIIDLSSKDIKGLEFGSEEDAYNFYFSYARCHGLAMRKNDEIRDVKGNVIMRQYLCRKVGLRDKRHVLRVDRKKEHRPLTRVNCEAKLRVRYDYKTGKFKVVSFIECHNHELTPAKFVPLIPSYRGLSEGGKAQVDALHSHGVRPCQIMGYLLDQKGGYANVGFCKKDLYNYIDEVKRGKIKDGDAMAGLNYLQGKADNEPIFSLGFYVLMMVN.	256

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g03210	255	MobiDBLite	consensus disorder prediction	1	21	-	-
	Seca7g03210	255	Pfam	FAR1 DNA-binding domain	64	154	IPR004330	-
	Seca7g03210	255	PANTHER	OS01G0519700 PROTEIN	50	245	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g03210	Seca-Chr7	94027785	94028552	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca7g03210		FAR1	1.1e-17	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g03210	-		-	ccaj:109794460	271.552