Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03209 ATGCCACTGCCACGGGCATTTATGGAGTACTTTCTGAAACAAGAATGGAGGTTTCTGGTGATACACCCCCATCGGTCAAGAAACTACAAATGCAATCTACTGTGGAGGGATAGAAATGAATTTGAATGTCACCTTGGGAGGGGGTGGTATCAATTTGTGAAAGACAAGGGTATGAAGACTGGAGATAGGGTTGTCCTCGAGACTCGTAGACCAAATTTCAACTATGATGAAATAACAATTGTGAGAAGTCAACCCAGAGATAATGGCAGGAGGGGCAGGGGTGGTCGTTAA 291 0.4467 MPLPRAFMEYFLKQEWRFLVIHPHRSRNYKCNLLWRDRNEFECHLGRGWYQFVKDKGMKTGDRVVLETRRPNFNYDEITIVRSQPRDNGRRGRGGR. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03209 96 Gene3D - 1 84 IPR015300 -
Seca7g03209 96 SUPERFAMILY DNA-binding pseudobarrel domain 2 73 IPR015300 -
Seca7g03209 96 ProSiteProfiles B3 DNA-binding domain profile. 1 84 IPR003340 GO:0003677
Seca7g03209 96 Pfam B3 DNA binding domain 2 68 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03209 Seca-Chr7 93880153 93880816 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca7g03209 B3 4.3e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03209 - K09287 lja:Lj4g3v2604210.1 52.7582