Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03199 ATGGTTTTCTTCTCCCTATGCATCAAGGAATGTTATCAATCAACTCTGAGACAACTTTTTCAAGAATTTGATCCTAGCAATCCAGAAGCTCAATTAGCATCTGTTGTAACAAGGATTATGCAGGCTCTCCAGAATAACCCAGATGGAAAATCAAAACAATATAAAGACCCAACGTTAGCTCAGTTGTTTCTTATGAATAATATCCATTACAAAGTGAAATCAGTGAGAAGGTTAGAGGCAAAGGACAAATACATAGAAGAATTGTCCACCAGCATGCAAATCAGTATAAAAGGATCTCTTGCGCAAAGGTTAAATTCTTTAAATACAATTACTTGTGCCAAAGAATCTGTGACTTAG 357 0.3557 MVFFSLCIKECYQSTLRQLFQEFDPSNPEAQLASVVTRIMQALQNNPDGKSKQYKDPTLAQLFLMNNIHYKVKSVRRLEAKDKYIEELSTSMQISIKGSLAQRLNSLNTITCAKESVT. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03199 118 Pfam Exo70 exocyst complex subunit 12 83 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g03199 118 SUPERFAMILY Cullin repeat-like 12 81 IPR016159 -
Seca7g03199 118 Gene3D Exocyst complex component Exo70 1 114 - -
Seca7g03199 118 PANTHER EXOCYST COMPLEX PROTEIN EXO70 12 90 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03199 Seca-Chr7 93715893 93719265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03199 12 82 EXO70 exocyst subunit family AT5G52340 71.831 2.38e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03199 K07195 - qsu:112031462 119.012