Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03195 ATGAAAACGAAACTTCTTCTTTTCATGCTCCTCCTTCTCCTTGTTCTTCACGAACCCATTTGGATCCTTGCCTCATCAGACCCACTTGCTTCCTCCATGCCAGTCCCTGTTTTCTCACCTGAAGTTCCACCCTTTTCTCCAATTCCCACATCAACAATGGCTGCTTCCTCTCCAGGTATTCTGGTGGGGAGTGAACAGCAACAAATGGATTCACACAAGAAAATGGTAATAGCTTTTGCTGTATCCAGCACTGCACTTGGTGCTGTCATTTTGTGTGTGTTATGCTTCTGGATTTATTATACCAAGAGTCCTTCAAAACCCAACAGGAAAAACGTTCAAAGCTCAGATGCTGAGAAAGGGCTTGCTTTAGCTCCATTTTTGAGTAAATTCAGCTCTGTGAAGATGGTTGGTAAGAAAGGGTGTGTCCCAATAATTGATTACAAGCAATTAGAAAAGGCTACAGGGAATTTCAAGGAAAGTAACATCTTGGGTGAGGGTGGTTTTGGATGTGTCTACAAGGCTCGGTTGGATGATAACTTGGATGTTGCTGTCAAGAAACTGCACTGTGAAAGTCACCATGCTGAGAGAGAATTTGAGTTGGATTGGATGAATTTGCAGAACGAGGTGGATTTGTTGAGTAAAATTCAGCATCCGAATGTAATTTCTCTACTGGGTTGTAGCAGTAATGAGGATACGAGGTTTATTGTCTATGAGTTGATGCAAAATGGATCATTGGAAACTCAGTTACATGGACCTTCTCGTGGCTCAGCATTGACTTGGCACATGAGGATGAAGATTGCTCTTGATACAGCAAGAGGTTTAAAATATCTGCATGAGCACTGTTACCCTCCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAAATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAACCGATGGGTCCCAAAACAAGAATAACATCAAGCTTTCAGGCACCTTGGGGTACGTAGCCCCAGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTCTATGCATTTGGAGTTGTGCTTCTGGAGCTTCTATTAGGAAGGAAGCCTGTAGAAAAACTGGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAACTCACAGACAGATCCAAGCTTCCAAACATTGTGGATCCTGTGATTAGGAATACGATGGATCCCAAGCACTTATACCAGGTTGCTGCTGTAGCAGTGCTATGTGTACAACCAGAACCATGTTACCGTCCACTGATAGCAGATGTTCTCCACTCACTCATCCCTCTTGTACCTGTTGAGCTTGGAGGAACACTGAGAGTGTCACAAGTAGTCACACAGCAAGTCTTACATGCTGATCCACCTGTGAATTCTAGTCAATGA 1404 0.4288 MKTKLLLFMLLLLLVLHEPIWILASSDPLASSMPVPVFSPEVPPFSPIPTSTMAASSPGILVGSEQQQMDSHKKMVIAFAVSSTALGAVILCVLCFWIYYTKSPSKPNRKNVQSSDAEKGLALAPFLSKFSSVKMVGKKGCVPIIDYKQLEKATGNFKESNILGEGGFGCVYKARLDDNLDVAVKKLHCESHHAEREFELDWMNLQNEVDLLSKIQHPNVISLLGCSSNEDTRFIVYELMQNGSLETQLHGPSRGSALTWHMRMKIALDTARGLKYLHEHCYPPVIHRDLKSSNILLNANFNAKLSDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIRNTMDPKHLYQVAAVAVLCVQPEPCYRPLIADVLHSLIPLVPVELGGTLRVSQVVTQQVLHADPPVNSSQ. 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03195 467 SUPERFAMILY Protein kinase-like (PK-like) 138 434 IPR011009 -
Seca7g03195 467 ProSitePatterns Protein kinases ATP-binding region signature. 163 186 IPR017441 GO:0005524
Seca7g03195 467 Pfam Protein kinase domain 158 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03195 467 CDD STKc_IRAK 163 437 - -
Seca7g03195 467 ProSiteProfiles Protein kinase domain profile. 157 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03195 467 FunFam probable receptor-like protein kinase At1g80640 240 439 - -
Seca7g03195 467 Gene3D Phosphorylase Kinase; domain 1 124 239 - -
Seca7g03195 467 PANTHER OS01G0750732 PROTEIN 56 438 - -
Seca7g03195 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Seca7g03195 467 Gene3D Transferase(Phosphotransferase) domain 1 240 439 - -
Seca7g03195 467 FunFam Protein kinase superfamily protein 124 239 - -
Seca7g03195 467 SMART serkin_6 157 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03195 Seca-Chr7 93615983 93619974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03195 19 380 Receptor kinase-like Gene Family AT1G80640 47.721 1.02e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Seca7g03195 Pkinase 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03195 - - gmx:100785380 746.503