Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03184 ATGTCTCAAATTGAGATAACATACCTGTTGCATCATTTGGGGTTTGACAATGAGGCAATGGTGGATATCTGCTTCAGATGTCTCAAATTGATTTCTCCAACCTCTATCTCCAGGTTTCATCATTTTTATGAGGCATTGATGGATATCAGCTTCACATCTTTCAAATTGTCTACTAATAACTATGGTTCAACATGGAATACTTTCCTGGAAAGCGACCATTTTAACCATGTCTCAACAGATGTCATATTCCATGATCCTGTCAATAATTTAGTTCATGTTCAAGTAATGAAGTGCGATGATCAGCTGTATTTTTGTCATGGTTGGAATATACTGGAGAATGTTTATCCGGTTAAAGATGGTGCTTGGATGAAGTTCTATTTTGCTAATGAAAATGAATTTTTTGTTAGAATATATGACCGAAATATGGTTGAGATAAATTATCCACTGCCTCCTAACGTTTTTGCCCATGGTATTGGGTTTGTGCCTGACATTGTTGTTCCTCCTTCGGGAAGTTTTGCTGAAGTCCAGCATGTATTTGTGGACAAAGTTTTGACTGATAAGAATGTGTCTTCTCATTGTGTGGCTTTGCCTTCTGTTTTATGTAAATGCATTCCTTTGAATGCTTCAAATATTGTTCTCAGAGATGAAAATCTTACTGATTTTGAATGTCGATTTCGCTGGGCAAGAAGAAGACTTCATGAGGGTTATATCTCCACTGGCTGGAAGGATTTTTGTAGTTTTAAAGGATTAAAGGGTGGATCTGTTTTGCGTTTTAGTTTTAGTTGCCAGAATCCTAGGGTCATCGAAGTTAGGATATTGTGA 822 0.3686 MSQIEITYLLHHLGFDNEAMVDICFRCLKLISPTSISRFHHFYEALMDISFTSFKLSTNNYGSTWNTFLESDHFNHVSTDVIFHDPVNNLVHVQVMKCDDQLYFCHGWNILENVYPVKDGAWMKFYFANENEFFVRIYDRNMVEINYPLPPNVFAHGIGFVPDIVVPPSGSFAEVQHVFVDKVLTDKNVSSHCVALPSVLCKCIPLNASNIVLRDENLTDFECRFRWARRRLHEGYISTGWKDFCSFKGLKGGSVLRFSFSCQNPRVIEVRIL. 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03184 273 Gene3D - 170 273 IPR015300 -
Seca7g03184 273 Gene3D - 37 143 IPR015300 -
Seca7g03184 273 SUPERFAMILY DNA-binding pseudobarrel domain 175 261 IPR015300 -
Seca7g03184 273 PANTHER B3 DOMAIN-CONTAINING 66 261 - -
Seca7g03184 273 ProSiteProfiles B3 DNA-binding domain profile. 179 273 IPR003340 GO:0003677
Seca7g03184 273 SUPERFAMILY DNA-binding pseudobarrel domain 72 141 IPR015300 -
Seca7g03184 273 Pfam B3 DNA binding domain 182 263 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03184 Seca-Chr7 92853536 92856428 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca7g03184 B3 1.2e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03184 - K25449 csav:115712442 48.1358