Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03182 ATGGCTTTGAGATATGATTTTATTAAGGATGTTAACGGTGGATCTGAATATAAGATATGGAGGCTGAAAGTAAGGGTTATCTGTTTATGGAGATTTGCTAACTTTCAGGAAAATAACAACAGTAATGTTAAACCAATGATAGAGATGGTGGTTCTTGATGAGCAGGGTTACAGGATTCAATGCACTGTGAAGAGTTTCCATGTTTATCTGTTTGAACAGAATTTGTTAGAGGGTAATGTGTACATGATATCTAATCTCAGTGTTGCTCTGAATTCTGCGAAGTTTAAACCCACTTCACATGAATTCAGAATGTTTTTTAAGAGGGAGACTGAGGTTCGTTTGGTTGAGGATTCCACCATTCCGGTAAATGCTTTCTGTTTTGTTCCATACAATGATATTCTGAATGAAATAAATGAAGAACGCCATTTGGTTGGTATGTTTTCAATTAAAATTAAAACTTACTCTCTGATTATCACTACACTTACAAACTGA 492 0.3476 MALRYDFIKDVNGGSEYKIWRLKVRVICLWRFANFQENNNSNVKPMIEMVVLDEQGYRIQCTVKSFHVYLFEQNLLEGNVYMISNLSVALNSAKFKPTSHEFRMFFKRETEVRLVEDSTIPVNAFCFVPYNDILNEINEERHLVGMFSIKIKTYSLIITTLTN. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03182 163 Pfam Domain of unknown function DUF223 48 136 IPR003871 -
Seca7g03182 163 SUPERFAMILY Nucleic acid-binding proteins 7 117 IPR012340 -
Seca7g03182 163 CDD RPA1_DBD_A_like 21 112 - -
Seca7g03182 163 Gene3D - 7 118 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03182 Seca-Chr7 92838250 92838809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03182 20 138 Core DNA Replication Machinery Family AT2G06510 28.926 9.81e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03182 - - adu:110274503 162.155