Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03171 ATGACAATTGCCTTTCAATTTCTTCTGCAGAACCTGTTGCAAAGTGAGACTGAAGGTGTTAATGATGAGAAGATTGGATTTTATGGAAGATGTGCACTTCATGCGAATGACCCTATATGTCAGTCTTCATATGATTCTATTGATGAAATGGGCAGTCAAGTAGAAAAGGAATTCACCTGTGCCAGGACAGAGGGTTACAAGGGCCGTAGACGGGATGGTTTTCAGAATAACCACTACAGGGCCTTAAAAGCCAAGAGGGGATGCCTTGTTCCTGAAGAGCAGTTAAATGCTTGGATTCACATTAATGGGCAGAAATTGTGTTCACAGGGTCTCACAAAATTTCCAGATTCAGATATTGAGCATGATTGTCGGAAGGAATATGCTCGGTACAAGCAAGCAAAGGGCTGGAAACGCCTTGTTGTATACAAATCTGGGATACATGCCCTCGGTCTTTACACTTCTCGGTTCATTTCCCGAGGTGAAATGGTTGTCGAGTATGTTGGTGAAATTGTTGGGCTACGTGTGGCTGATAAAAGAGAAAATGAATATCATTCTGGAAGGAAACTTCAGTACAAGAGTGCCTGCTACTTCTTTAGGATAGACAAAGAACATATTATTGATGCCACAAGGAAAGGGGGGATTGCTCGATTTGTTAACCACTCATGCCTGCCAAATTGTGTGGCAAAAGTGATTACTGTAAGGCATGAGAAGAAGGTTGTCTTCTTTGCAGAGCGGGACATATTTCCTGGTGAAGAGATTACGTACGATTACCACTTCAACCACGAAGACGAAGGAAAGAAGATTCCATGTTACTGCAATTCCAAAAATTGCAGGCGCTATTTGAACTGA 849 0.4229 MTIAFQFLLQNLLQSETEGVNDEKIGFYGRCALHANDPICQSSYDSIDEMGSQVEKEFTCARTEGYKGRRRDGFQNNHYRALKAKRGCLVPEEQLNAWIHINGQKLCSQGLTKFPDSDIEHDCRKEYARYKQAKGWKRLVVYKSGIHALGLYTSRFISRGEMVVEYVGEIVGLRVADKRENEYHSGRKLQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVITVRHEKKVVFFAERDIFPGEEITYDYHFNHEDEGKKIPCYCNSKNCRRYLN. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03171 282 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 11 282 - -
Seca7g03171 282 SMART set_7 137 264 IPR001214 GO:0005515
Seca7g03171 282 SUPERFAMILY SET domain 107 278 IPR046341 -
Seca7g03171 282 ProSiteProfiles Post-SET domain profile. 266 282 IPR003616 -
Seca7g03171 282 ProSiteProfiles SET domain profile. 137 258 IPR001214 GO:0005515
Seca7g03171 282 Pfam SET domain 150 257 IPR001214 GO:0005515
Seca7g03171 282 SMART PostSET_3 266 282 IPR003616 -
Seca7g03171 282 CDD SET_SETD1-like 138 278 - -
Seca7g03171 282 Gene3D SET domain 31 282 IPR046341 -
Seca7g03171 282 FunFam Histone-lysine N-methyltransferase 47 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03171 Seca-Chr7 92445410 92447436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03171 138 282 C2H2 Transcription Factor Family AT2G23740 35.152 7.40e-19 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca7g03171 SET 7.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03171 - - aprc:113846680 510.375