Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03163 CGATCTATATTCATTCACGAAAATATTTTGTTGGCTGTAGTCAGGAATGACCTTACCACTTTGGAGTCCTTGCAATTTGAATTAACGAAAATAGAAGCTGCAACAAACAGGTTTGCCACAGAAAATAGGATAGGCAATGGCGGATTTGGAGAATTCTATAAGGGTATTCTTTCAGATAGGCAAGAAATTGTTGTGAAGAGACTTACAAGAAGCTCTGGGCAAGGTGCAGTAGAGTTTAAAAATGAGGTTCAAGTAATAGCCAAGCTTCAACACAGCGAGGATGTGCAGATCGGTCTATATTCATCCAAGACATTCATATTCATTTTCACACTTGCAGATCCATATATATTCATTCTCACATTCACAGAATTTATTTTCAAAAAAGACATAAAAGAGACAAAAAACAAAATACTCTCAGATCGGCGACGGCGACGGCGACGACGAACACCGACGGCGACGGTGACTTTGTCTCTGCGAACAGCGACAGCGACTGCGAACGGCTTTGCCTCTGCGAACGGCGACGGCGAACGGCGACTGCGAACGGCGACTGCGAACGGCGAACAGTGA 567 0.4392 RSIFIHENILLAVVRNDLTTLESLQFELTKIEAATNRFATENRIGNGGFGEFYKGILSDRQEIVVKRLTRSSGQGAVEFKNEVQVIAKLQHSEDVQIGLYSSKTFIFIFTLADPYIFILTFTEFIFKKDIKETKNKILSDRRRRRRRRTPTATVTLSLRTATATANGFASANGDGERRLRTATANGEQ. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03163 188 Gene3D Phosphorylase Kinase; domain 1 6 104 - -
Seca7g03163 188 SUPERFAMILY Protein kinase-like (PK-like) 12 92 IPR011009 -
Seca7g03163 188 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03163 Seca-Chr7 92220460 92221124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03163 16 97 Receptor kinase-like Gene Family AT4G11480 52.439 4.39e-25 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca7g03163 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03163 - - adu:107467162 129.413