Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03138 ATGTCTGGAGAAGTCATTGCTACTCCATCAGCTGCTTCTTTTGATTATGAGATCTTGGACAGTGATCCTGACATCGTTAGAACTGTTAGGGCCTCATCCAATCAAGCAAATCCATGGATTGAACCTGAAAGGTTGAAACTTAGACACAGAATTGGTCGGGGGCCCTTTGGTGATGTTTGGCTAGCAACACATCATCAGTCAACTGAAGATTATGATGAGTACCATGAAGTTGCTGCTAAGATGTTATATCCAATCAGAGAAGAACATGTGAAGATTGTATTGGAGAAGTTCAATGACTTATTCTACAAGTGCCAAGGAGTTGCTAGCGTTTGCTGGCTACATGGAATTTCAATCATAAATGGAAGGATCTGCGTCATTATGAATTTGTATGAAGGTTCAATTGGTGACAAGATGGCTAGACTCAGAGAAGGGTGGATTTCATTGCATGATGTTTTGAGGTATGGAATCAACCTAGCTCAAGCTATTCTGGAACTTCACTCCAAAGGGATCCTCATTCTCAACCTTAAACCATTCAATGTTCTTCTCAATGATAATGATCAAGCAGTTTTGGGAGATGTTGGTATTCCCAGTCTTTTGCTTGGCTCCTCCTTCGTTAGCTCAGATATGGCTCAGAGGCTTGGAACTCCAAACTACATGGCCCCAGAACAATGGGAACCAGAGGTCAGAGGCCCTATATCCTTGGAAACAGATTCATGGGGATTTGGATGCACCATTGTCGAAATGTTGACTGGCAATCAACCTTGGTATGGATATCCTGTTGGTGCAATATACCAATCGGTTGTTGAAAAACATGAAAAACCACATATTCCAAGCGGCCTTCCTTCTTCAATTGAGAATATCGTTAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCTTCAATGGTGGAAATTCTGAACGTCTTTAAAAGGTTTGTTTCCATATATGACTGA 954 0.4151 MSGEVIATPSAASFDYEILDSDPDIVRTVRASSNQANPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLYPIREEHVKIVLEKFNDLFYKCQGVASVCWLHGISIINGRICVIMNLYEGSIGDKMARLREGWISLHDVLRYGINLAQAILELHSKGILILNLKPFNVLLNDNDQAVLGDVGIPSLLLGSSFVSSDMAQRLGTPNYMAPEQWEPEVRGPISLETDSWGFGCTIVEMLTGNQPWYGYPVGAIYQSVVEKHEKPHIPSGLPSSIENIVSGCFEYDLRNRPSMVEILNVFKRFVSIYD. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03138 317 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03138 317 SUPERFAMILY Protein kinase-like (PK-like) 42 308 IPR011009 -
Seca7g03138 317 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Seca7g03138 317 Gene3D Phosphorylase Kinase; domain 1 23 129 - -
Seca7g03138 317 Gene3D Transferase(Phosphotransferase) domain 1 131 315 - -
Seca7g03138 317 PANTHER OS06G0639500 PROTEIN 1 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03138 Seca-Chr7 91263004 91266603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03138 51 307 MAP Kinase Kinase Kinase AT1G05100 27.305 2.10e-18 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Seca7g03138 PK_Tyr_Ser-Thr 1.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03138 - - gsj:114393396 561.992