Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03132 ATGTGCTCAGTCTGCAAAAATAAAAGACTTAATATTGAATGGCAAAAGGAATTCACTCGTGAGGAACTTATACAAGCAGCCACAGATGGATTTTCTTTGAAAAATTGTCTCTCTGAATGTGGATATCCATTTTCAACTTGTAGAGGCCAGCTGGATGGAGAGATGACAATAGTAGTTAAACAGCATGAAATAACAAATGCACAAGTAAGGGAAAAAATAAAGTCAGAAGTCCAAACCATCCTCAAAGCTAGACATAAGAATGTGGTCATGCTATTGGGTTCAACTACAAAAGAGTTATACATTTATATTGTTTTCACGTCATCTTTTATTAAGTTTGACTTGTACTACATTTGTTAA 357 0.3417 MCSVCKNKRLNIEWQKEFTREELIQAATDGFSLKNCLSECGYPFSTCRGQLDGEMTIVVKQHEITNAQVREKIKSEVQTILKARHKNVVMLLGSTTKELYIYIVFTSSFIKFDLYYIC. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03132 118 SUPERFAMILY Protein kinase-like (PK-like) 18 105 IPR011009 -
Seca7g03132 118 Gene3D Phosphorylase Kinase; domain 1 4 105 - -
Seca7g03132 118 PANTHER OS01G0323000 PROTEIN 10 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03132 Seca-Chr7 91053105 91053461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03132 18 115 Trihelix Transcription Factor Family AT1G26150 34.653 1.05e-09 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Seca7g03132 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03132 - - tpra:123916481 154.451