Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03129 ATGGGGAAACATTGGACTTTCTTCCATGTTATGGATACCCTTTGGTTGTGTATCCTCCTTTTGTCTGAAGTGGTTTTGGCTGGTACTCTATGGGTTGGAAAGGTCTCTCCAGGGTTTGAAGGGTCTCAAATGAATTGGATTGACAGGAATGGCAAGTTCCTTGTGTCAAATAATGGAGAATTTGGCTTTGGCTTTGTCACCACTGCAGATGACAGCACATTGTTTCTACTGGCAGTGGTCCACATGGACAGTACCAAGGTGGTTTGGGTTGCAAATAGAGAACTTCCTGTTTCCAATTCTGATAAATTTGTGTTTGATGAGAAAGGTAATGTCTTTTTACAAAAAGGAGGAGCTGTTGTATGGTCTACAGGTACAGGTGGAAAAGGAGTTTCTTTAATGGAATTGCAGGACACTGGAAATTTGGTTTTGCTTGGGAATGATAGTAGAATGATTTGGCAGAGTTTCAGCCATCCAACAGATACCTTGTTGCCAATGCAGGATTTCAAGGAAGGAATGAAACTTATCAGTGAACCTGATTCTAACAACTTGACCTATGTCCTTGAGATTGAATCTGGCAATGTTATTCTTTCCTCAGGTTTACAAACACCACAGCTTTATTGGTCTATGCAAAAGGATAGCCGCAAAATCATCAATAAAAATGATTCAGCTGCAAATGCTACTTGGATTGCAGTTTTGGGAAGTGATGGTTTTATTACTTTCTCCAATCTCCAAAGTAGAGGGACAATTAGTGCCTCACCAACAAGAATACCACAAGATTCTTGTAGTACTCCAGAACCTTGTGGTCCTTATAACATATGCACTGGTGACAAAAAGTGTAGTTGCCCTTCTGTTCTCAGCTCTAGTCCTAATTGCAAACCAGGGTTTGTCTCTCCTTGTAACTCCAAAAACTCCATTGAGCTCCTGAAAGCTGATGATGGACTTGATTACTTTGCACTTGGGTTTCTTACACCTTCTTCAAAAACTGATTTGATTGGTTGCAAAAGTTCTTGCAGTAAAAACTGCTCATGCCTTGGTATGTTCTTTCACAACAGTTCAGGGAACTGTTTCCTGTTGGACAGGATTGGAAGCTTTGAGAAATCTGATAAGGATTCTGGTTTTGTCTCTTACATTAAGGTCTCTAATGATGGCACAGGCACAGGAGACAGTGGAAACAGCAAAATGCAGACAATAGTAGTTGTGATTATTGTAATAGTAACATTGCTTGTGATTTCTGGCATGCTCTTTGTAGGGTTTAGATGCTTCAAGAAAGAGGAAAACATGCCTGAGTCTCCCCAAGAGCATTCAGAAGAGGACAATTTATTGGAGAATTTAACTGGCATGCCAATCCGTTACAGCTACAATGATCTAGAAACTGCAACAAATAACTTCTCTGTGAAGCTTGGGCAAGGGGGTTTTGGCTCAGTTTATAAAGGAGTTCTACCAGATGGGACTCAACTAGCTGTGAAGAAGTTGGAAGGAATTGGTCAAGGGAAGAAAGAGTTCAGGGTTGAAGTTAGCATTATTGGCAGCATTCATCACCACCATTTGGTTAGGCTTAAAGGATTCTGTGCTGAAGGATCACACAAGCTTCTTGCTTATGAGTATATGGCCAATGGCTCATTGGATAAATGGATATTCAAGAAAAACAAAAGAGAGTTTCTGTTGGATTGGGAAACAAGGTTTAATATAGCACTAGGAACAGCAAAAGGACTTGCTTACCTCCATGAAGATTGTGACTCAAAGATTGTTCACTGTGATATCAAACCAGAAAATGTGCTTCTAGATGATCATTTCCAAGCCAAAGTTTCAGATTTTGGTCTAGCTAAGCTCATGACACGTGAACAAAGCCATGTTTTCACTACACTAAGGGGAACAAGGGGGTATCTTGCACCAGAGTGGATCACAAACTATGCTATATCAGAGAAAAGTGATGTTTATAGCTATGGAATGGTGTTGCTAGAGATCATTGGAGGAAGGAAAAACTATGATCCTGCTGAAAGTTCAGAGAAATCCCATTTCCCATCTTATGCTTTTAAGATGATGGAAGAAGGGAAAGTGAAAGATGTTATTGATTCAGAGCTGAAAACATATGAAAATGATGAGAGGGTTCACATTGCTATCAAAGTTGCATTATGGTGCATACAAGAAGACATGTCTCTGAGGCCTTCTATGACCAAAGTTGTCCAAATGCTAGAGGGTCTATGCACAGTTCCAAAGCCACCAACTTGTTCTCCATTGGGATTTCGCCTTTACTCAAGTTTACTCAAACCCACAAGTGAGAGTGGCACTTCTTCTTCAGGACCACCAGATTATAACAGTGATGCCTATCTCTCTGCTGTTCGGCTTTCAGGGCCAAGATAA 2361 0.4058 MGKHWTFFHVMDTLWLCILLLSEVVLAGTLWVGKVSPGFEGSQMNWIDRNGKFLVSNNGEFGFGFVTTADDSTLFLLAVVHMDSTKVVWVANRELPVSNSDKFVFDEKGNVFLQKGGAVVWSTGTGGKGVSLMELQDTGNLVLLGNDSRMIWQSFSHPTDTLLPMQDFKEGMKLISEPDSNNLTYVLEIESGNVILSSGLQTPQLYWSMQKDSRKIINKNDSAANATWIAVLGSDGFITFSNLQSRGTISASPTRIPQDSCSTPEPCGPYNICTGDKKCSCPSVLSSSPNCKPGFVSPCNSKNSIELLKADDGLDYFALGFLTPSSKTDLIGCKSSCSKNCSCLGMFFHNSSGNCFLLDRIGSFEKSDKDSGFVSYIKVSNDGTGTGDSGNSKMQTIVVVIIVIVTLLVISGMLFVGFRCFKKEENMPESPQEHSEEDNLLENLTGMPIRYSYNDLETATNNFSVKLGQGGFGSVYKGVLPDGTQLAVKKLEGIGQGKKEFRVEVSIIGSIHHHHLVRLKGFCAEGSHKLLAYEYMANGSLDKWIFKKNKREFLLDWETRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFQAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPAESSEKSHFPSYAFKMMEEGKVKDVIDSELKTYENDERVHIAIKVALWCIQEDMSLRPSMTKVVQMLEGLCTVPKPPTCSPLGFRLYSSLLKPTSESGTSSSGPPDYNSDAYLSAVRLSGPR. 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03129 786 SMART serkin_6 461 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03129 786 FunFam serine/threonine-protein kinase PBS1-like 429 535 - -
Seca7g03129 786 ProSitePatterns Protein kinases ATP-binding region signature. 467 490 IPR017441 GO:0005524
Seca7g03129 786 SMART blect_4 45 158 IPR001480 -
Seca7g03129 786 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 44 743 - -
Seca7g03129 786 FunFam Serine/threonine-protein kinase 41 156 - -
Seca7g03129 786 SUPERFAMILY Protein kinase-like (PK-like) 443 732 IPR011009 -
Seca7g03129 786 Gene3D - 47 157 IPR036426 -
Seca7g03129 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 209 IPR036426 -
Seca7g03129 786 MobiDBLite consensus disorder prediction 759 786 - -
Seca7g03129 786 CDD STKc_IRAK 467 734 - -
Seca7g03129 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Seca7g03129 786 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Seca7g03129 786 Pfam Protein kinase domain 465 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03129 786 CDD B_lectin 47 158 IPR001480 -
Seca7g03129 786 ProSiteProfiles Protein kinase domain profile. 461 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03129 786 PIRSF SRK 8 233 IPR024171 GO:0004674
Seca7g03129 786 PIRSF SRK 179 781 IPR024171 GO:0004674
Seca7g03129 786 Gene3D Phosphorylase Kinase; domain 1 424 535 - -
Seca7g03129 786 FunFam S-receptor-like kinase 5 536 740 - -
Seca7g03129 786 Gene3D Transferase(Phosphotransferase) domain 1 536 739 - -
Seca7g03129 786 Pfam D-mannose binding lectin 87 168 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03129 Seca-Chr7 91023779 91026233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03129 408 741 Receptor kinase-like Gene Family AT5G20050 44.507 2.50e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca7g03129 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03129 - - gmx:100787500 1271.53