Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03100 ATGACAAAGAAGAAGAATCCCCTGGTGTTTATGGATGTGTCTATAGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTTTTCCATGATGTTGCTCCAAAGACTGCTGAAAATTTTCGTGCTTTATGTACAGGAGAAAAGGGAGTCAGTCCAAATAGTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCACATTGTAAAAGGATCCATTGTGCGGGGTGGTGATTTTGTCAATCGAAATGTCATTGCTTATCCATTGTACGGCATCCCAAATGCAGAATGTTCTGTACATTATACTATACTCCTGCTTCACATTTTCCTGTGTTTTGTAGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTTCCAGATGAGTCACCTAGGCTTAAGCATGATGCTCCAGGACTTCTATCCATGGCAATTGCTGATCGTGACACTCTTGGTTCTCATTTTATCATCACTTTGAAAGCTGATCACCATCTTGATAGGAAGCATGTAGTCTTTGGCAAGATTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAAAAGGACTTCCAACTGTAACTGTTAAAATAATTAATTGTGGTGAATATAATGATGATGGAAAGAAGACATGCAAGTCAAAAATAGGAAGGGATGGATTTTCTGAGGCCAATAGTCTTGAAGCACGGCGGAAGGGAAAGCAAAAAAAATCTTCAGGAGACAGAAGGAAAAGGAGAAAAAACTACTCATCAGAATCAAATAGTTCTTCAGATTCAGACATGAATTCTTCAGAAAGTGATAGTGATTCTGACTCAGATGTGTCTTCATCTTCTTACACAAGTTCCTCTAGTGATGACAGGCGAAGGAAGAGAAAGAGATCCAGGAAAGATAAACATAGACGTGGAAAAAGAAGAGATAAACATCGAGACAAGAGGCGGAGGAAACAAGATAAGAGATCAAAGCGTAAATCAAGAAGGGAATCAAGCAGTAATACTGATTCGGATAGTGAAAGTAAGGGTTACAATAGCTCTGATAACAAAAGTCTTGGTGCTCAAGGGAATCAGAAGAGTAAAGATCATTCTCAAAGAAATGCAGAAGATCAATCTTCCTTAGGTTTGGAGAAAGAATTACCTCCCGTGCATCTTAAAAAGAGGGAGAGGATGGGTATGCTAGAGGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGGCGCAGCAACGGCATTGGGGCCAAACATAAGTCTGACAGAAGTGAAGAGAGGCAGCCTGACGTGATGGATGATCATCCAGGGAAATCTAGGAGTCGAAGCATGAGTCCCAAGCGATCCATGAGTAAGAGTATGAGTATTAGTCCAAGGAGTGAGATCAAAAGCCCAAGCCTTAGTCCAAAAAGGAGATTGAGCAGAAGTCCAAGTGGTAGTAGAAGCCCTCGTGCTCCAACACGGAGGAGTTTGAGCAGGAGTCCAGGTAGAAGCATAAGCAGAAGTCCAAACAGAAGCATCAGCAGAAGCCCAGTGAGAGGCAGGAAGGGGAGAAGTGTCAGTAGAAGCCCTATGAGAACTCGTGATCATAGAAGTGTAAGTGAGAGCCCTGTGAGATCTCGTGATCGAAGAAGTTTCAGCAAGAGCCCTGTAAGTTCTTTTTCTCATAGCCACAGGAGCAAGAGTTCTCCTAGAGTATCATCACGAAGAACAATCAGTAGAAGTCCTGTTAGAGTTTCAAGAAAGAGCATAAGCAGGAGTCCAGTTAAATCATCACGAATAACAATCAGTAGAAGCCCTGTAAGAGTGTCAAGAAAGAGCATAAGCAGGAGTCCAGTTAGATCATCACGAAGAACAATTAGTAGAAGCCCTGTAAGAGTGTCAAGAAAGAGCATAAGCAGGAGTCAGTTAGATCAACACGAAGAACAGTTAGTAGAAGCCCTGAGTCCAGTTAGATCATCACGCAGAACAATTAGTAGAAGCCCTGTAAGAGTGTCAAGAAAGAGCATAAGCAGGAGTCCAGTTAGATCATCTGCCCGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCCTTTGAGAAACATTAGCCAAAGTCCAGTTAGAATGCCAAGCAGAGGCAATCACCGCAGTTATTCTAGGAGTCATAGCCCTGTTCGTAGGGCAAGGACTCCTCGTGGAAGGAGTTTGTCAAGAAGTGTGTCACCTGATGCTTCACCAAAACGTATCAGGAGGGGAAGAGGTTTTAGTGAACGATACTCTTATGCTAGAAGGTATAGAACCCCCTCTCGGTCTCCTGTGAGGTCATACCGCTTCAATGGAAGAAGTGACCGTGACAGATATTCAGGTTACAGAAGGTACTCCCCTAGGCGTTTCAGGAGCCCACCACCGCGTGGAAGGACTTCGCCAAGGTACCGAAGCAGGAAAAGCAGAACACCATCTGTATCACGCAGCCCACGTTACCGAGGTCGACGATATAGCAGAAGCCAGAGCCCAGTTCGCAGTCGTTCATCACCTCGTGTGGATAGGCAAATGTCATCTCAGAGCAGGAGTCGATCACGATCCAGGTCTTCAGTGGAATCACAATCTCCAAGAAAAGCAAGCAGAGACAACAGGTCAAGGTCTTCATCTGGAAGCCCAGACGTGAAGAAAGGCCTGGTCTCTTATGGAGATGGTTCTCCCGATTCAAGCAGAGGGTGA 2676 0.4421 MTKKKNPLVFMDVSIDGDPVERMVFELFHDVAPKTAENFRALCTGEKGVSPNSGKSLHYKGSFFHHIVKGSIVRGGDFVNRNVIAYPLYGIPNAECSVHYTILLLHIFLCFVGTGGESIYGSKFPDESPRLKHDAPGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKIVQGHNILKKIEDVGDEKGLPTVTVKIINCGEYNDDGKKTCKSKIGRDGFSEANSLEARRKGKQKKSSGDRRKRRKNYSSESNSSSDSDMNSSESDSDSDSDVSSSSYTSSSSDDRRRKRKRSRKDKHRRGKRRDKHRDKRRRKQDKRSKRKSRRESSSNTDSDSESKGYNSSDNKSLGAQGNQKSKDHSQRNAEDQSSLGLEKELPPVHLKKRERMGMLEEEEFPKENGERRSNGIGAKHKSDRSEERQPDVMDDHPGKSRSRSMSPKRSMSKSMSISPRSEIKSPSLSPKRRLSRSPSGSRSPRAPTRRSLSRSPGRSISRSPNRSISRSPVRGRKGRSVSRSPMRTRDHRSVSESPVRSRDRRSFSKSPVSSFSHSHRSKSSPRVSSRRTISRSPVRVSRKSISRSPVKSSRITISRSPVRVSRKSISRSPVRSSRRTISRSPVRVSRKSISRSQLDQHEEQLVEALSPVRSSRRTISRSPVRVSRKSISRSPVRSSARSLSRSSGRVPLRNISQSPVRMPSRGNHRSYSRSHSPVRRARTPRGRSLSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRFNGRSDRDRYSGYRRYSPRRFRSPPPRGRTSPRYRSRKSRTPSVSRSPRYRGRRYSRSQSPVRSRSSPRVDRQMSSQSRSRSRSRSSVESQSPRKASRDNRSRSSSGSPDVKKGLVSYGDGSPDSSRG. 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03100 891 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 164 IPR002130 GO:0000413|GO:0003755
Seca7g03100 891 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 IPR002130 GO:0000413|GO:0003755
Seca7g03100 891 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 165 180 IPR002130 GO:0000413|GO:0003755
Seca7g03100 891 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Seca7g03100 891 MobiDBLite consensus disorder prediction 763 778 - -
Seca7g03100 891 MobiDBLite consensus disorder prediction 705 719 - -
Seca7g03100 891 Gene3D - 1 205 IPR029000 -
Seca7g03100 891 MobiDBLite consensus disorder prediction 378 435 - -
Seca7g03100 891 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 204 - -
Seca7g03100 891 MobiDBLite consensus disorder prediction 437 503 - -
Seca7g03100 891 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 203 IPR002130 GO:0000413|GO:0003755
Seca7g03100 891 MobiDBLite consensus disorder prediction 516 540 - -
Seca7g03100 891 MobiDBLite consensus disorder prediction 289 323 - -
Seca7g03100 891 MobiDBLite consensus disorder prediction 730 750 - -
Seca7g03100 891 MobiDBLite consensus disorder prediction 822 854 - -
Seca7g03100 891 MobiDBLite consensus disorder prediction 644 704 - -
Seca7g03100 891 MobiDBLite consensus disorder prediction 541 626 - -
Seca7g03100 891 MobiDBLite consensus disorder prediction 224 891 - -
Seca7g03100 891 SUPERFAMILY Cyclophilin-like 4 208 IPR029000 -
Seca7g03100 891 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 204 IPR002130 GO:0000413|GO:0003755
Seca7g03100 891 MobiDBLite consensus disorder prediction 335 359 - -
Seca7g03100 891 MobiDBLite consensus disorder prediction 253 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03100 Seca-Chr7 90195353 90206277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03100 26 200 U-box Gene Family AT5G67530 33.333 1.61e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03100 K09566 - cave:132189182 593.964