Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03088 ATGGGACCATTTAGCGGAATAGCTCAAGATGTCAAAGGTAGAGCTAAATGCTATAAACATGATTGGGTTGGTGCATGCTGTTCTGGCATAAGGATATTGGCTCCAACTTTCTACATATTCTTCGCTTCCGCTCTCCCTGTTGTTGCTTTTGGGGAGCAACTTAGTAGAGATACAGATGGAAGCTTGAGCACAGTGGAAACATTGGCATCTACTGCTATTTGTGGAATTATCCACTCAATATTTGGTGGTCAGCCTTTGTTGATTTTAGGAGTTGCTGAACCTACTGTTATAATGTACACTATTCTGTATGAGTTCTGCATAAAACGGCCAGAACTAGGTGCCAAGCTTTTTCTACCTTGGGCTGCTTGGGTTTGTGTCTGGACAGCACTCTTGTTGATTCTGCTTGCAGTATTTAACGCGTGTGCAGTTATCACTAGGTTCACAAGAATTGCAGAGGAATTATTTGGGATGCTAATTACGGTCCTTTTCTTTCAGCAGGCTATAAAGGGACTCATAAGTGAGTTCAACATACCCAAGGCTGAAAATCCGTTGTTAGAGGAATATCAATTTCAATGGCGGTATACAAATGGATTACTTGCAATCATTTTCTCTTTTGGGTTACTTTTCACTGCCTTTATAAGCAGGAGAGCAAGATCATGGCGATATGGAGCAGGGTGGCTACGGGGTTTCATTGCAGATTATGGGGTTCCCATGATGGTGGTCTTTTGGACAGCACTATCTTATACTGTACCAAGTAAAGTTCCAACTGGTGTTCCCAGAAGGCTGTTTTGTCCACTTCCCTGGGAATCTGCCTCTCTTTACCATTGGACAGTAGTGAAGGATATGATGAAGGTACCCTTGCCATATATCTTTGGGGCATTTATTCCAGCTCTGATGGTAGCGGGTTTATACTTTTTTGATCACAGTGTAGCTTCTAAGATGGCTCAACAGAAGGAATTTAACCTTCAAAAACCACCTGCCTACCACTATGATATTTTCCTGCTTGGAATAATGACTCTGATTTGCGGTATTCTTGGCCTTCCTCCAGCAAATGGAGTCCTTCCTCAGTCCCCCATGCATACAAAGAGTTTGGCAGTTCTTAGGAGGCAGAATATCAACTCAAATACATTCATACATTACTATATCAATTTACAGTTGATACGAAAGAAGGTGGTGAAAAGTGCCAAGGAATGCATTAAGCAACAAGGGAGCAACTCTGAATTATATGGAAAGATGCAAGCTGTGTTTCTAGAAATGGATACAGCACCTACTGATAAAGAGTTGGAGACTTTGAAAAAGGCTGTGATGAAATCTAATGAAAAGGATGGTGCAAAGGAAAATTTTGATCCTGATAAACACATAGATGCTTATCTACCTGTCAGGGTAAATGAGCAAAGAATAAGCAACTTATTGCAGTCTCTCCTGGTTGCCCTATCACTTTTAGCCGTCTCTGTCATCAAAAGGATACCTACTTCAGTTCTATGGGGATATTTTGCTTACATGGCAATTGATAGTCTTCCAGGGAATCAATTCTGGGAAAGGATATTACTTCTCTTCATCCCCCCAAGCCGGCAATACAAAATTTTGGAAAGTTCTCATGCTTCATTTGTGGAGTCAGTACCATTCAAGAGCATAGCTGCATTTACAGTTTTACAATTTGTATACTTTGTGATCTGTTATGGAGTGACATGGATACCTACAGGCGCAATCCTGTTCCCACTACCTTTCTTCTTTCTCATAACTATAAGAGAGCATTTGCTTCCAAAGCTTTTCAAGCCTAACCATCTTCAGGAACTTGATGCTGCTGAGTACGAGGAAATTGCTGGTGCTCCACATGCAACTCATAATATATCACTAAGGGACAAGGAGACAGGTGATAACGACAGTGATAAGAGCTCAGAGGATTATTATGACGCAGAGATATTGGATGAGATGACAACCCACAGGGGAGAGTTGAAACTTAGAACTGTAAGCCAAAATGATAGTAGAAGTTTCAGCCGCAGCTTCAGTTACAGCTTCAGTGAAGACAGAGACAGGCAGTGTCAGGTTCACCCTGAAGAAGCAAACCGGATGTGA 2076 0.4162 MGPFSGIAQDVKGRAKCYKHDWVGACCSGIRILAPTFYIFFASALPVVAFGEQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTILYEFCIKRPELGAKLFLPWAAWVCVWTALLLILLAVFNACAVITRFTRIAEELFGMLITVLFFQQAIKGLISEFNIPKAENPLLEEYQFQWRYTNGLLAIIFSFGLLFTAFISRRARSWRYGAGWLRGFIADYGVPMMVVFWTALSYTVPSKVPTGVPRRLFCPLPWESASLYHWTVVKDMMKVPLPYIFGAFIPALMVAGLYFFDHSVASKMAQQKEFNLQKPPAYHYDIFLLGIMTLICGILGLPPANGVLPQSPMHTKSLAVLRRQNINSNTFIHYYINLQLIRKKVVKSAKECIKQQGSNSELYGKMQAVFLEMDTAPTDKELETLKKAVMKSNEKDGAKENFDPDKHIDAYLPVRVNEQRISNLLQSLLVALSLLAVSVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFIPPSRQYKILESSHASFVESVPFKSIAAFTVLQFVYFVICYGVTWIPTGAILFPLPFFFLITIREHLLPKLFKPNHLQELDAAEYEEIAGAPHATHNISLRDKETGDNDSDKSSEDYYDAEILDEMTTHRGELKLRTVSQNDSRSFSRSFSYSFSEDRDRQCQVHPEEANRM. 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03088 691 Gene3D Helical hairpin bin 14 56 - -
Seca7g03088 691 PANTHER ANION EXCHANGE PROTEIN 3 608 IPR003020 GO:0005452|GO:0006820|GO:0016020
Seca7g03088 691 Pfam HCO3- transporter family 189 370 IPR011531 GO:0006820|GO:0016020
Seca7g03088 691 Pfam HCO3- transporter family 460 551 IPR011531 GO:0006820|GO:0016020
Seca7g03088 691 Pfam HCO3- transporter family 3 176 IPR011531 GO:0006820|GO:0016020
Seca7g03088 691 MobiDBLite consensus disorder prediction 657 691 - -
Seca7g03088 691 FunFam probable boron transporter 2 14 56 - -
Seca7g03088 691 MobiDBLite consensus disorder prediction 672 691 - -
Seca7g03088 691 MobiDBLite consensus disorder prediction 657 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03088 Seca-Chr7 89802527 89808153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03088 2 658 Antiporters AT5G25430 67.069 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03088 K24194 - gmx:100808880 1075.85