Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03084 ATGGTTGATTATTGTGAAGGAAATTCTGTTAATGGAGATAAGGTTAATATTTCGAATGATGGAAATTTTAATTGTAAGGGGGCTGATTTAGGACAGAATGAGGATGAAGAATATATGAAGAGAATTAGTGAATTGACTGTTGATGATATAAGAGGTATTGAATTTGATGATGAGGAAGCTGCTTGTAGTTTTTATAAAAGCTATGCAAAATGTAATGGGTTTGTTGTTAGGAAGGATGAGGTAGACCGTGATTTTAAGGGAAATATTGTTATGAGACAACTGGTGTCTAACAGAGAGGGTGAAAGGAAGAAGAAACATTTGATGCGTGTGGACAGAGTTAGGCAGCCCAGGGCTTTAACTCGAACTCGGTGTCCTGCAAGGCTAAGAGTACATTATAGTTTCAAGACTAGTAAGTGGAGAGTTGTTGTATTTGAGGAAAAGCACAATCATGAGTTAACTCCTCTTAAATTTGTTCATTTGATACCTGCTTATAGAGGTTTGACTGAAGCTGATAAAGTTCAGGTTAATAACTTACACACACATGGTGTAAGGACTTGCCATATTTTGGGTTTGTTGTTAGGCCAGAAGGGTGGTCATTCAGAGTTGGGTTTATGTAAGAAGGATCTATATAATCACATTGATAAGGAGAAGAGGGCGGTTATAGAAGATGGGGATGCTTTTGCTGCATTATGTTATTTGCAGGCTAAGATTGTTAATGATCCAATGTCATACACATTATTTACCACTACAGATGATGGGTGTTTACAGAACTTGTTTTGGGCTGATGGTGCAAGTCGTGTAGATTATGAATGTCATGATACACCCATTTATGATTTTAACCTAAGGTCTCAATAA 855 0.3684 MVDYCEGNSVNGDKVNISNDGNFNCKGADLGQNEDEEYMKRISELTVDDIRGIEFDDEEAACSFYKSYAKCNGFVVRKDEVDRDFKGNIVMRQLVSNREGERKKKHLMRVDRVRQPRALTRTRCPARLRVHYSFKTSKWRVVVFEEKHNHELTPLKFVHLIPAYRGLTEADKVQVNNLHTHGVRTCHILGLLLGQKGGHSELGLCKKDLYNHIDKEKRAVIEDGDAFAALCYLQAKIVNDPMSYTLFTTTDDGCLQNLFWADGASRVDYECHDTPIYDFNLRSQ. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03084 284 Pfam FAR1 DNA-binding domain 63 153 IPR004330 -
Seca7g03084 284 PANTHER OS01G0519700 PROTEIN 47 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03084 Seca-Chr7 89784690 89785544 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g03084 FAR1 7.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03084 - - ccaj:109792835 295.434