Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03066 ATGAAGGATCAAAGTGGCCACACTATAAGCTGGACTTTGTGGGAGGAGTATGCAAGCCAGGTTTTCTCTTTCCTAGGAACTCATGAAGGTGGCCCAATCATCATGCTACTTAGTCTTGCAAAGATAAAGGAAGCTAAGGGAAACTACCCAGTTACTGTTCAAAATACAAAGGTACACTCAAGGCTATACATCAATGAAGACATTGATGAGATCAATAAATTCAAAAGCAGCTTGGACTCAACTCATGTGTATGAGTCATACAGTCAAAGACCGAGTCAGTTATCTTCGACAAGTCATATTACCCAGGGAGAAATATTTGTTCAAGATGCAAATGTCATGAGTTTAGCTAAAATCAATGAGACAAAAGAGGGTTTGCTTCGTCGCCTCCGTCTTTTCCCTCTTTCACGCTTCCATCATCGACGCCATCGCCGATCCGAACTTTCCACGTGTCGCACGCTAGTTCATCGATGGATTGGAGAAGACGAGGTTGTGGCCGTCAATCTATTGATCGCAGCGGTTTGGTCGTGGGCTCTAATCACCGTATTTTCTAGGGTTGTTCTCGGGAGGCATTATGTTCTCAATGTCTTATTTGGAGGTTGCTTCGGTGTCCTCGAAGCTGTCTTCACCGTACGCTTTCTCAAATTCCATGTGCTGGACTTGATTGGAGATTCATCATTTTTTAAGACATATTCCTCAGCTCCTTTTATAAGTAGTGGCTCTGGCAGTGATGTTGTGTATACACCATCTGACCCTGGTGGACTAGGCAACTCAAGGTCATGGTTTACATATGAGGAGCTAATCAAGGCCACAAATGGTTTCTCAAGTCAAAATCTTTTGGGTGAGGGTGGATTTGGTTCTATATATAAAGGATGCTTACCTGATGGGAGAGAGATAGCAGTCAAACAGCTGAAAGTTGGTGGAGGACAAGGGGAGAGAGAATTCAAAGCTGAAGTGGAAATTATTAGTCGCATACATCATCGCCATTTGGTCTCTTTAGTGGGATACTGCATTGAAGATAAGAGAAGACTACTTGTCTATGACTATGTCCCTAACGACACACTTTTTTTCATCTACATGCCTGTGCTAGATTGGGCAAAACGTGTTAAAATTGCAGCTGGTGCAGCTCGAGGAATAGCTTATCTCCATGAAGACTGGCCGATGCTGTCCATGTGTTTGGGGTTTGCAAAGCAGCCGTTCCCAACAAAGTCAGGATCATGTGGCACTGTTGTAAGAAATGCTGAGCTTAAGGTTGTTGACCCTGAAACTGGTCTTTCTCTTGGCTACAATCAACCTGGTGAAATCTGCATCCGAGGGCAACAGATCATGAAAGTTCCCGTTGCCTTCGTGGTGAGGTCAAATGGCTTTGATCTAACAGAAGAAGCTGTAAAGGAGTTTATATCTAAACAGGCTTCTAGCATTCCATTTGTTTTAGTTGAGAACAGCGGGAGATATAACAAAAATGAAAGTGATGAAAAGGTTCTTCTAAATGGGATTTCTTGTATTCTTTATCTGCTCCAAAAAATCACAAAAGTGGCTGAGTGGCTACAAGTCTATTTATGTTGA 1563 0.428 MKDQSGHTISWTLWEEYASQVFSFLGTHEGGPIIMLLSLAKIKEAKGNYPVTVQNTKVHSRLYINEDIDEINKFKSSLDSTHVYESYSQRPSQLSSTSHITQGEIFVQDANVMSLAKINETKEGLLRRLRLFPLSRFHHRRHRRSELSTCRTLVHRWIGEDEVVAVNLLIAAVWSWALITVFSRVVLGRHYVLNVLFGGCFGVLEAVFTVRFLKFHVLDLIGDSSFFKTYSSAPFISSGSGSDVVYTPSDPGGLGNSRSWFTYEELIKATNGFSSQNLLGEGGFGSIYKGCLPDGREIAVKQLKVGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIEDKRRLLVYDYVPNDTLFFIYMPVLDWAKRVKIAAGAARGIAYLHEDWPMLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGLSLGYNQPGEICIRGQQIMKVPVAFVVRSNGFDLTEEAVKEFISKQASSIPFVLVENSGRYNKNESDEKVLLNGISCILYLLQKITKVAEWLQVYLC. 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03066 520 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 243 384 IPR047117 -
Seca7g03066 520 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Seca7g03066 520 Pfam AMP-binding enzyme 398 443 IPR000873 -
Seca7g03066 520 SUPERFAMILY Protein kinase-like (PK-like) 255 385 IPR011009 -
Seca7g03066 520 SUPERFAMILY Nucleic acid-binding proteins 2 83 IPR012340 -
Seca7g03066 520 SUPERFAMILY Acetyl-CoA synthetase-like 397 471 - -
Seca7g03066 520 Gene3D - 374 441 IPR042099 -
Seca7g03066 520 FunFam Proline-rich receptor-like protein kinase PERK8 246 348 - -
Seca7g03066 520 Pfam Protein kinase domain 275 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03066 520 Gene3D - 1 88 IPR012340 -
Seca7g03066 520 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 167 215 IPR036938 -
Seca7g03066 520 ProSiteProfiles Protein kinase domain profile. 273 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03066 520 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 131 219 - -
Seca7g03066 520 CDD RPA1_DBD_B_like 1 79 - -
Seca7g03066 520 Gene3D Phosphorylase Kinase; domain 1 253 348 - -
Seca7g03066 520 Gene3D - 442 516 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03066 Seca-Chr7 89264337 89273415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03066 223 384 Trihelix Transcription Factor Family AT1G26150 65.060 1.28e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Seca7g03066 Pkinase 2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03066 - - gmx:100812440 289.271