Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03059 ATGGATAATCATATAACAAGGCTTAATTGGGCTATTCTTAATACTTTGTGTAGAGATAAGAACAACATAGTGTTTCTTGTTAGTGCTAAAAGCCGAAAGTATCTCTCTGAATGGTTTTCTCCTTGTGAGAATCTGGGAGTTGCAGCTGAGCATGGTTACTTTATAAGAATGAAGCGAGATGCAGAATGGGAAACATGTGTTCCTACAACAGATTGTAGCTGGAAACAAATTGCAGAGCCTGCTATGAAACTTTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGCAGACCGCACTTGTTTGGTGCTATGAGGATGTAGATCCTGATTTTGGATCATGCCAAGGTAAGGAACTTCTTGATCATCTTGAAAGTGTGCTGGCAAATGAACCTGTAACAGTCAAAAGTGGCCAGAATAATGTAGAGGTCAAACCACAAGTGTGTATAACATTCTAG 459 0.39 MDNHITRLNWAILNTLCRDKNNIVFLVSAKSRKYLSEWFSPCENLGVAAEHGYFIRMKRDAEWETCVPTTDCSWKQIAEPAMKLYTETTDGSTIEDKQTALVWCYEDVDPDFGSCQGKELLDHLESVLANEPVTVKSGQNNVEVKPQVCITF. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03059 152 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 2 101 - -
Seca7g03059 152 Pfam Trehalose-phosphatase 11 148 IPR003337 GO:0003824|GO:0005992
Seca7g03059 152 Gene3D - 67 147 - -
Seca7g03059 152 SUPERFAMILY HAD-like 2 147 IPR036412 -
Seca7g03059 152 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 11 148 IPR001830 GO:0003824|GO:0005992
Seca7g03059 152 FunFam Trehalose-6-phosphate synthase 2 68 147 - -
Seca7g03059 152 Gene3D - 11 66 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03059 Seca-Chr7 88742543 88743095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03059 12 147 Trehalose Biosynthesis Gene Families AT1G68020 80.882 8.42e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03059 K16055 - pda:103706802 258.84