Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03040 ATGTATTCGAGCCTGGTTTTCATTTTCAATGAACTTTTGTTTTTTCATTTTCTCAAGGTTCTAGCTTCTCAGAAGCAGTTAGAAAGCAAGTACACAGCCGTCCAAAAAGCTTCTGATGATTGGTATCGAAGGGCACAACTTGCTCTTCAGAAGGGGGATGAGAAGAGTGAATTGGGCTGGGAAATTGTTCAAGAAGAATCTATTAAGAATCCTGGACGACACAAAAGATTGTGGGATCAGGAGGAAGTTTGTGATGTATTGACAAATGATAGGGGAACTGGTGAAGTTGAAGCCATATTTTTAGATATGACTCAAATTACTTACATAAATTTAATGTTGAATTGA 345 0.3739 MYSSLVFIFNELLFFHFLKVLASQKQLESKYTAVQKASDDWYRRAQLALQKGDEKSELGWEIVQEESIKNPGRHKRLWDQEEVCDVLTNDRGTGEVEAIFLDMTQITYINLMLN. 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03040 114 PANTHER MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC 19 55 IPR007157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03040 Seca-Chr7 87768474 87769257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03040 59 108 WRKY Transcription Factor Family AT4G12020 44.000 9.12e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03040 - - lja:Lj3g3v2692950.1 87.8113