Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03014 ATGGACAATTGCAATGACAATGTAGAAGTTGTAATCATCTCTGATGAAGAAGAGGGGGGAAATAGTAGAGAAGGTGTAAATGATGATGGTGTAGGTCGTGTCACAGTTGATAGTTGGGAAGATTTTTTACAATTTGATAGGAAGAAGCTAAGCCCTCTTGAGACCAAAAGAATTGATTTTGGCAGCCTTGATTTGGCCTTTCAGTTTTATCAACGGTATGCAAAATTTAATGGTTTTGCAGCTCGGAAACATAATATTGTAGAAAACAAAAGGAAGGAGACCATTCAACAAACTTTTGTGTGCAACAAGGAAGGTAAAAGGAGGGTTAGAATAAAAAGCAAAGAAGGATACTTGCGAGAACCAAGACCGAAGACTAGATGTGAATGTCAAGCCTAA 396 0.3788 MDNCNDNVEVVIISDEEEGGNSREGVNDDGVGRVTVDSWEDFLQFDRKKLSPLETKRIDFGSLDLAFQFYQRYAKFNGFAARKHNIVENKRKETIQQTFVCNKEGKRRVRIKSKEGYLREPRPKTRCECQA. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03014 131 Pfam FAR1 DNA-binding domain 68 131 IPR004330 -
Seca7g03014 131 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 40 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03014 Seca-Chr7 86629218 86629613 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g03014 FAR1 9e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03014 - K17604 tpra:123886262 85.8853