Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02959 ATGAAACAACAATATTCAGCTTTTCTTGGAGGTGAGGGGCGTGATCTTACATGGCTGAATATGGATAGGCCTGTGACAAATTTTGATGAGGTCTCTTTTCACTTTATTGATTGCATACATAACCATCTCCGCTCCAAAGTAAAGATGGAAGGAAACACTTCCTTGCATCCTCCTCCATTAGACTCATCTTTGAACACTCCTGTCAGAAATGCATCACACGGATCTCAGGCACCATCATCAAATCCTGGATATGCACAATATAGCGTGGATGGACTCAAGGATTGTGATAAATTGGTTATTGACTATCTGCAGCAGCATTCAGATATGTCAGATGAACGGGGAATACATGTTAATGAACTATCTCGAGAACTCAAGCTTCCATTGGACAAGATCATGTTGTCTCTGAAGACTCTTGGAGATGATGGTTTGGTATACTCCACCATAGATGATTTCCATTACAAACAGGCTTGA 471 0.4098 MKQQYSAFLGGEGRDLTWLNMDRPVTNFDEVSFHFIDCIHNHLRSKVKMEGNTSLHPPPLDSSLNTPVRNASHGSQAPSSNPGYAQYSVDGLKDCDKLVIDYLQQHSDMSDERGIHVNELSRELKLPLDKIMLSLKTLGDDGLVYSTIDDFHYKQA. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02959 156 PANTHER REPLICATION PROTEIN A-RELATED 23 154 IPR040260 -
Seca7g02959 156 MobiDBLite consensus disorder prediction 56 85 - -
Seca7g02959 156 FunFam Replication protein A 32 kDa subunit 87 156 - -
Seca7g02959 156 Pfam Replication protein A C terminal 66 150 IPR014892 -
Seca7g02959 156 SUPERFAMILY "Winged helix" DNA-binding domain 90 154 IPR036390 -
Seca7g02959 156 Gene3D - 86 156 IPR036388 -
Seca7g02959 156 MobiDBLite consensus disorder prediction 50 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02959 Seca-Chr7 84611532 84614237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02959 23 154 Core DNA Replication Machinery Family AT2G24490 35.036 7.01e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02959 K10739 - gmx:100802512 204.527