Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02957 ATGGCGGAAATGAGCAATCTTGGTGCCCTGGAACACCCCAACCTTGTTAAATTGGTTGGATACTGCATAGAAGGGGATGACAGGGTTTTGGTGTATGAGTTTATGCCTAGAGGAAGTTTAGAACATCATCTCTTTAGGAGAGGAACATTGCCCCTTCCATGGTCTATCAGACTGAAAATTTTGATTGGTGCTGCAAGGGGCCTTACTTTTCTGCATGAGGAAGATACAAAGCCATTAATTTATCGAGACATCAAAACTTCTAACATCCTATTGGATTTGGACTACAGTACGAAACTTTCTGATTTTGGGTTGGTGAAAGATGCCCCAGTGGGTGACTTGACTCATGTGTCAACAAGAGTGATGGGAACTCAAGGGTATGCAGCCCCTGAGTATGGGATGGCAAGGTACTTAAGTTAG 417 0.4365 MAEMSNLGALEHPNLVKLVGYCIEGDDRVLVYEFMPRGSLEHHLFRRGTLPLPWSIRLKILIGAARGLTFLHEEDTKPLIYRDIKTSNILLDLDYSTKLSDFGLVKDAPVGDLTHVSTRVMGTQGYAAPEYGMARYLS. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02957 138 Gene3D Transferase(Phosphotransferase) domain 1 1 137 - -
Seca7g02957 138 PANTHER OS01G0588500 PROTEIN-RELATED 2 134 - -
Seca7g02957 138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Seca7g02957 138 SMART serkin_6 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02957 138 SUPERFAMILY Protein kinase-like (PK-like) 2 134 IPR011009 -
Seca7g02957 138 FunFam Os07g0541700 protein 35 123 - -
Seca7g02957 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02957 138 Pfam Protein kinase domain 2 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02957 Seca-Chr7 84557146 84557930 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02957 1 131 Glycoside Hydrolase AT3G07070 55.639 3.11e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca7g02957 Pkinase 8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02957 - - egr:104422555 219.935