Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02955 ATGTTGGTTGTGTTTATTAGATTTGACTTGAATCTTTTTTCCATTGTAGGAAAGAAACCTATAAGAGATAATGGTAAAGCCCCAGTGGTTGCTGAAGCATCATCAAGCAACAATAACAATCCAGGAACAAGTGGATCTGCTCCCAACTTGATCATGGAACTGGAATATTATTCCCATCTTAGGAAATTCACCTTTCATGAGCTCAAGTTGGCTACTAAGAATTTCAAAGCTGGGAATTTTCTTGGTGATGGTGGCTTTGATACCGTACACAAAGGCTGGATCACTCAAGATGATTGCTCCCCATCAAGACCTGGAGTGGGGATTCCAAATGCAGTCAAGACCCTCACCATAGAAGGAAATCAGGGTCACAAAGAATGGGTGGGTGAAGTGAGCAATTTTGGTGCCCTGGAACACCCCAACCTTGTTAAATTGGTTGGATACTGCATAGAAGGGGATGACAGGGTTTTGGTGTATGAGTTTATTCCTAGAGGAAGTTTAGAACATCATCTCTTTAGGAGTACTGCATGCTCACATACAGGAGGAGCATTGCCCCTTCAATGGTCTATCAGACTGAAAATTTTGATTGGTGCCGGAAAGGGACTTACTTTTCTGCACGAGGAAGATACAAAGCCATTAATTTATCGAGACTTCAAAACTTTTAACATCCTATTGGATTCAGGCTACAGTGCGAAACTTTCTGATTTTGGGTTAGTGAAAGATGCCCCAGTGGGTGACTTGACTCATGTGTCAACTAGAGTGATGGGAACTCAAGGGTATGCAACCCCTGAGTATGTGATGACAGGGCACTTGAGTTCGAAGAGTGATGTGTATAGCTTTGGAGTGGTATTGCTTGAGGTAATGACAAGGAAAAGGGCGATAGATAAGAAGAGGCCACTAGCGGAGCATCACTTAGTGGAATGGGCAAGGCCTCAAATAAAGCATGGAGCAAGAACACAATGA 960 0.4292 MLVVFIRFDLNLFSIVGKKPIRDNGKAPVVAEASSSNNNNPGTSGSAPNLIMELEYYSHLRKFTFHELKLATKNFKAGNFLGDGGFDTVHKGWITQDDCSPSRPGVGIPNAVKTLTIEGNQGHKEWVGEVSNFGALEHPNLVKLVGYCIEGDDRVLVYEFIPRGSLEHHLFRSTACSHTGGALPLQWSIRLKILIGAGKGLTFLHEEDTKPLIYRDFKTFNILLDSGYSAKLSDFGLVKDAPVGDLTHVSTRVMGTQGYATPEYVMTGHLSSKSDVYSFGVVLLEVMTRKRAIDKKRPLAEHHLVEWARPQIKHGARTQ. 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02955 319 SUPERFAMILY Protein kinase-like (PK-like) 55 309 IPR011009 -
Seca7g02955 319 Gene3D Phosphorylase Kinase; domain 1 51 160 - -
Seca7g02955 319 FunFam Serine/threonine-protein kinase BIK1 43 160 - -
Seca7g02955 319 PANTHER OS01G0588500 PROTEIN-RELATED 44 312 - -
Seca7g02955 319 Gene3D Transferase(Phosphotransferase) domain 1 161 319 - -
Seca7g02955 319 ProSiteProfiles Protein kinase domain profile. 75 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02955 319 Pfam Protein tyrosine and serine/threonine kinase 77 289 IPR001245 GO:0004672|GO:0006468
Seca7g02955 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02955 Seca-Chr7 84534808 84536113 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02955 22 317 Glycoside Hydrolase AT3G07070 46.465 6.34e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca7g02955 PK_Tyr_Ser-Thr 2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02955 - - tcc:18601446 366.311