Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02942 ATGGCTACTAGGGACGTCATAGCTTTGACAGGAGGACCATCTTATGATGTAGAGTTGGGAAGGCTAGATGGGAGAATCTCCACAAAAGCCAGTGTCAGACACCATCTACCTCATCCTGAATTCAAACTAGCAAAGCTGCGCCAAATGTTTGCTTCACATGGCCTCACCCTAACAGATCTAATTGCTCTATCAGGAGCACATACTATTGGGTTCTCTCACTGCAGCCAGTTCTCTAAAAGAATTTACAACTTCAAAAGTGGGAAGAGAATTGATCCTTCACTTAATCTTGCATATGCAAAACAACTCCAGCAAGTGTGTCCAAAAAATGTGGACCCCAGAATTGCCATTGACATGGACCCTTCTACACCTAGGACATTTGATAACCAGTATTACAAGAATCTCCAGCAAGGAAAAGGACTCCTTTCTTCTGATCAATCTTTGTTTACTCATAAAAGTTCAAGAAACCTGGTGAACTTATTTGCATCAAACAGCACAGCCTTTGAAAGGTCTTTTGTGATTGCTATAACAAAGCTTGGACGGATTGGGATTAAAACGGGAAACCAGGGTGAAATTAGGCGTGATTGCACAATGGTTAACTGA 600 0.4183 MATRDVIALTGGPSYDVELGRLDGRISTKASVRHHLPHPEFKLAKLRQMFASHGLTLTDLIALSGAHTIGFSHCSQFSKRIYNFKSGKRIDPSLNLAYAKQLQQVCPKNVDPRIAIDMDPSTPRTFDNQYYKNLQQGKGLLSSDQSLFTHKSSRNLVNLFASNSTAFERSFVIAITKLGRIGIKTGNQGEIRRDCTMVN. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02942 199 PRINTS Haem peroxidase superfamily signature 1 11 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 PRINTS Haem peroxidase superfamily signature 59 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 PRINTS Haem peroxidase superfamily signature 119 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 PRINTS Haem peroxidase superfamily signature 11 23 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 Pfam Peroxidase 1 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 SUPERFAMILY Heme-dependent peroxidases 1 199 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 PANTHER - 1 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 PRINTS Plant peroxidase signature 11 26 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 PRINTS Plant peroxidase signature 117 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 PRINTS Plant peroxidase signature 173 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 PRINTS Plant peroxidase signature 58 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 PRINTS Plant peroxidase signature 133 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 CDD secretory_peroxidase 1 198 IPR033905 GO:0004601|GO:0042744
Seca7g02942 199 ProSiteProfiles Plant heme peroxidase family profile. 1 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g02942 199 ProSitePatterns Peroxidases proximal heme-ligand signature. 59 69 IPR019793 -
Seca7g02942 199 FunFam Peroxidase 37 178 - -
Seca7g02942 199 Gene3D Peroxidase, domain 2 37 178 - -
Seca7g02942 199 Gene3D - 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02942 Seca-Chr7 84056636 84058650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02942 1 199 Peroxidase AT4G30170 66.332 1.01e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02942 K00430 - gmx:100793327 346.665