Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02941 ATGTACCCAATACAACACCGCAAGTACAGAGATGGAATTGACAATCTTTTGGTTCTCTTGATTGGAGGAATTCCCATTGCCATGCCAACTGTTTTGTCTGTCACTATGGCTATTGGTTCTCACAGGCTTTCCCAGCAAGGTGCAATTACAAAAAGAATGACAGCTATTGAGGAAATGGCTGGGATGGATGTCCTCTGCAGTGACAAAACCGGGACTCTCACTCTGAATAAGCTAAGTGTTGATAAAAACTTGATTGAGGTGCTTGTTAAGGGTGTTGAGAAGGACCATGTTGTTCTTCTAGCAGCCAGAGCTTCAAGGACTGAAAATCAGGATGCTATAGATGCTGCTATTGTTGGGATGCTTGCTGACCCTAAGGAGGCAAGAGCTGGTATCACAGAGATCCATTTCCTTCCATTCAATCCTGTAGACAAGAGAACTGCTCTTACCTACACTGATTCCAATGGAAATTGGCATCGAGCTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTTTGCAACTGCAAAGAGGGTGTCAAGAAAAAGGTTCATGCAATAATTGATCAGTTTGCTGACCGTGGACTTAGGTCTTTAGGTGTTGCAAGACAGGAAGTACCTGAGAAAGATAAAGATAGTCCTGGTGGACCATGGCAATTTGTTGGCCTGCTACCACTGTTTGATCCTCCCAGGCATGATAGTGCTGAAACCATTAGAAGAGCTCTTATCCTTGGTGTGAATGTGAAGATGATCACTGGGGACCAGCTTGCCATTGGCAAGGAAACAGGCAGAAGGCTTGGAATGGGAAGCAACATGTACCCCTCATCTGCATTGCTTGGCCAAGACAAGGATACTTCTACTATTTCAGATCTTCCAATTGATGAGTTGATTGAAAAGGCTGATGGATTTGCAGGAGTTTTTCCTGAACACAAATATGAAATTGTCAGGAGGCTGCAAGAGAGGAAGCATATATGTGGAATGACAGGAGATGGTGTAAATGATGCCCCAGCATTGAAGAAAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACTGAACCTGGTCTGAGTGTCATCATTAGTGCAGTTCTCACCAGCAGAGCAATTTTCCAGAGGATGAAGAATTATACTATTTATGCTGTGTCAATCACCATTCGTATTGTGTTTGGTTTCTTGTTTATTGCATTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTCTTGATTATTGCCATCCTAAATGATGGTACTATTATGACAATATCCAAGGATAGAGTTAAACCATCTCCAAAGCCTGACAGCTGGAAACTGAAAGAAATCTTTGCTACTGGTATTGTGTTAGGCAGTTACATGGCACTAATGACAGTTATATTTTTCTGGGCAATGAAAGATACCAGCTTCTTCTCGGTAAATTATTTTTTATATTTTTTACTTGACAAGTTTGGTGTGAGGTCTCTGAGATATAGCCCTCAAGAGATGATGGCTGCTTTGTACCTACAAGTCAGTATAATTAGCCAGGCACTAATTTTTGTGACTAGGTCTCGCAGCTGGTCTTTTCTTGAAAGACCTGGTCTTCTCCTAGTTGGTGCCTTTATAATTGCTCAGCTGATAGCAACTTTTATAGCAGTATATGCTAACTGGGGCTTTGCAAGAATAAAGGGAATGGGATGGGGTTGGGCTGGTGTGATCTGGTTGTACAGTTTGGTAACCTATATCCCTCTTGATATACTCAAATTTGCAATCCGCTATTTTCTGAGTGGGAAAGCTTGGGATAATATTTTGGAGAACAAGACTGCCTTCACTACAAAGAAAGACTATGGCATTGAAGAGAGGGAAGCACAATGGGCAGCTGAACAGAGAACACGTCATGGTCTTCAGCCTCCAGATACCTCCAACCTTTTTGATGACAAGAGTAGCTATAGGGAGCTTTCAGAGATTGCAGAGCAAGCTAAGAGACGTGCTGAAGTTGTAAGGCTTAGGGAACTTCATACTCTAAAGGGACATGTTGAGTCAGTGGCGAAGCTGAAGGGGCTTGACATTGATACAATGAATCATCACTATACAGTTTAA 2097 0.4239 MYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVLVKGVEKDHVVLLAARASRTENQDAIDAAIVGMLADPKEARAGITEIHFLPFNPVDKRTALTYTDSNGNWHRASKGAPEQILNLCNCKEGVKKKVHAIIDQFADRGLRSLGVARQEVPEKDKDSPGGPWQFVGLLPLFDPPRHDSAETIRRALILGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSALLGQDKDTSTISDLPIDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPKPDSWKLKEIFATGIVLGSYMALMTVIFFWAMKDTSFFSVNYFLYFLLDKFGVRSLRYSPQEMMAALYLQVSIISQALIFVTRSRSWSFLERPGLLLVGAFIIAQLIATFIAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPLDILKFAIRYFLSGKAWDNILENKTAFTTKKDYGIEEREAQWAAEQRTRHGLQPPDTSNLFDDKSSYRELSEIAEQAKRRAEVVRLRELHTLKGHVESVAKLKGLDIDTMNHHYTV. 699
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02941 698 Pfam haloacid dehalogenase-like hydrolase 62 340 - -
Seca7g02941 698 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 595 IPR023298 -
Seca7g02941 698 FunFam Plasma membrane ATPase 218 374 - -
Seca7g02941 698 Gene3D - 80 225 IPR023299 GO:0000166
Seca7g02941 698 SFLD Haloacid Dehalogenase 48 378 - -
Seca7g02941 698 Coils Coil 649 669 - -
Seca7g02941 698 Gene3D - 647 698 - -
Seca7g02941 698 PRINTS P-type cation-transporting ATPase superfamily signature 242 252 - -
Seca7g02941 698 PRINTS P-type cation-transporting ATPase superfamily signature 66 80 - -
Seca7g02941 698 PRINTS P-type cation-transporting ATPase superfamily signature 349 361 - -
Seca7g02941 698 PRINTS P-type cation-transporting ATPase superfamily signature 326 345 - -
Seca7g02941 698 PRINTS P-type cation-transporting ATPase superfamily signature 220 231 - -
Seca7g02941 698 FunFam Plasma membrane ATPase 78 225 - -
Seca7g02941 698 Gene3D - 327 593 - -
Seca7g02941 698 ProSitePatterns E1-E2 ATPases phosphorylation site. 68 74 IPR018303 -
Seca7g02941 698 NCBIfam HAD-IC family P-type ATPase 301 416 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca7g02941 698 PRINTS H+-transporting ATPase (proton pump) signature 182 200 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca7g02941 698 PRINTS H+-transporting ATPase (proton pump) signature 298 314 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca7g02941 698 PRINTS H+-transporting ATPase (proton pump) signature 326 342 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca7g02941 698 PRINTS H+-transporting ATPase (proton pump) signature 357 382 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca7g02941 698 PRINTS H+-transporting ATPase (proton pump) signature 507 528 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca7g02941 698 PANTHER CALCIUM-TRANSPORTING ATPASE 4 630 - -
Seca7g02941 698 FunFam ATPase 4 plasma membrane-type 310 562 - -
Seca7g02941 698 NCBIfam plasma-membrane proton-efflux P-type ATPase 2 553 IPR006534 GO:0008553|GO:0016020|GO:0120029
Seca7g02941 698 SUPERFAMILY HAD-like 62 373 IPR036412 -
Seca7g02941 698 Gene3D - 1 79 - -
Seca7g02941 698 SFLD p-type atpase 48 378 IPR044492 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca7g02941 Seca-Chr7 84038682 84042584 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02941 1 698 Primary Pumps ATPases AT2G24520 84.097 0.0 1220
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02941 K01535 - gmx:100791692 1234.17