Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g02941 | ATGTACCCAATACAACACCGCAAGTACAGAGATGGAATTGACAATCTTTTGGTTCTCTTGATTGGAGGAATTCCCATTGCCATGCCAACTGTTTTGTCTGTCACTATGGCTATTGGTTCTCACAGGCTTTCCCAGCAAGGTGCAATTACAAAAAGAATGACAGCTATTGAGGAAATGGCTGGGATGGATGTCCTCTGCAGTGACAAAACCGGGACTCTCACTCTGAATAAGCTAAGTGTTGATAAAAACTTGATTGAGGTGCTTGTTAAGGGTGTTGAGAAGGACCATGTTGTTCTTCTAGCAGCCAGAGCTTCAAGGACTGAAAATCAGGATGCTATAGATGCTGCTATTGTTGGGATGCTTGCTGACCCTAAGGAGGCAAGAGCTGGTATCACAGAGATCCATTTCCTTCCATTCAATCCTGTAGACAAGAGAACTGCTCTTACCTACACTGATTCCAATGGAAATTGGCATCGAGCTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTTTGCAACTGCAAAGAGGGTGTCAAGAAAAAGGTTCATGCAATAATTGATCAGTTTGCTGACCGTGGACTTAGGTCTTTAGGTGTTGCAAGACAGGAAGTACCTGAGAAAGATAAAGATAGTCCTGGTGGACCATGGCAATTTGTTGGCCTGCTACCACTGTTTGATCCTCCCAGGCATGATAGTGCTGAAACCATTAGAAGAGCTCTTATCCTTGGTGTGAATGTGAAGATGATCACTGGGGACCAGCTTGCCATTGGCAAGGAAACAGGCAGAAGGCTTGGAATGGGAAGCAACATGTACCCCTCATCTGCATTGCTTGGCCAAGACAAGGATACTTCTACTATTTCAGATCTTCCAATTGATGAGTTGATTGAAAAGGCTGATGGATTTGCAGGAGTTTTTCCTGAACACAAATATGAAATTGTCAGGAGGCTGCAAGAGAGGAAGCATATATGTGGAATGACAGGAGATGGTGTAAATGATGCCCCAGCATTGAAGAAAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACTGAACCTGGTCTGAGTGTCATCATTAGTGCAGTTCTCACCAGCAGAGCAATTTTCCAGAGGATGAAGAATTATACTATTTATGCTGTGTCAATCACCATTCGTATTGTGTTTGGTTTCTTGTTTATTGCATTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTCTTGATTATTGCCATCCTAAATGATGGTACTATTATGACAATATCCAAGGATAGAGTTAAACCATCTCCAAAGCCTGACAGCTGGAAACTGAAAGAAATCTTTGCTACTGGTATTGTGTTAGGCAGTTACATGGCACTAATGACAGTTATATTTTTCTGGGCAATGAAAGATACCAGCTTCTTCTCGGTAAATTATTTTTTATATTTTTTACTTGACAAGTTTGGTGTGAGGTCTCTGAGATATAGCCCTCAAGAGATGATGGCTGCTTTGTACCTACAAGTCAGTATAATTAGCCAGGCACTAATTTTTGTGACTAGGTCTCGCAGCTGGTCTTTTCTTGAAAGACCTGGTCTTCTCCTAGTTGGTGCCTTTATAATTGCTCAGCTGATAGCAACTTTTATAGCAGTATATGCTAACTGGGGCTTTGCAAGAATAAAGGGAATGGGATGGGGTTGGGCTGGTGTGATCTGGTTGTACAGTTTGGTAACCTATATCCCTCTTGATATACTCAAATTTGCAATCCGCTATTTTCTGAGTGGGAAAGCTTGGGATAATATTTTGGAGAACAAGACTGCCTTCACTACAAAGAAAGACTATGGCATTGAAGAGAGGGAAGCACAATGGGCAGCTGAACAGAGAACACGTCATGGTCTTCAGCCTCCAGATACCTCCAACCTTTTTGATGACAAGAGTAGCTATAGGGAGCTTTCAGAGATTGCAGAGCAAGCTAAGAGACGTGCTGAAGTTGTAAGGCTTAGGGAACTTCATACTCTAAAGGGACATGTTGAGTCAGTGGCGAAGCTGAAGGGGCTTGACATTGATACAATGAATCATCACTATACAGTTTAA | 2097 | 0.4239 | MYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVLVKGVEKDHVVLLAARASRTENQDAIDAAIVGMLADPKEARAGITEIHFLPFNPVDKRTALTYTDSNGNWHRASKGAPEQILNLCNCKEGVKKKVHAIIDQFADRGLRSLGVARQEVPEKDKDSPGGPWQFVGLLPLFDPPRHDSAETIRRALILGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSALLGQDKDTSTISDLPIDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPKPDSWKLKEIFATGIVLGSYMALMTVIFFWAMKDTSFFSVNYFLYFLLDKFGVRSLRYSPQEMMAALYLQVSIISQALIFVTRSRSWSFLERPGLLLVGAFIIAQLIATFIAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPLDILKFAIRYFLSGKAWDNILENKTAFTTKKDYGIEEREAQWAAEQRTRHGLQPPDTSNLFDDKSSYRELSEIAEQAKRRAEVVRLRELHTLKGHVESVAKLKGLDIDTMNHHYTV. | 699 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g02941 | 698 | Pfam | haloacid dehalogenase-like hydrolase | 62 | 340 | - | - | |
Seca7g02941 | 698 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 4 | 595 | IPR023298 | - | |
Seca7g02941 | 698 | FunFam | Plasma membrane ATPase | 218 | 374 | - | - | |
Seca7g02941 | 698 | Gene3D | - | 80 | 225 | IPR023299 | GO:0000166 | |
Seca7g02941 | 698 | SFLD | Haloacid Dehalogenase | 48 | 378 | - | - | |
Seca7g02941 | 698 | Coils | Coil | 649 | 669 | - | - | |
Seca7g02941 | 698 | Gene3D | - | 647 | 698 | - | - | |
Seca7g02941 | 698 | PRINTS | P-type cation-transporting ATPase superfamily signature | 242 | 252 | - | - | |
Seca7g02941 | 698 | PRINTS | P-type cation-transporting ATPase superfamily signature | 66 | 80 | - | - | |
Seca7g02941 | 698 | PRINTS | P-type cation-transporting ATPase superfamily signature | 349 | 361 | - | - | |
Seca7g02941 | 698 | PRINTS | P-type cation-transporting ATPase superfamily signature | 326 | 345 | - | - | |
Seca7g02941 | 698 | PRINTS | P-type cation-transporting ATPase superfamily signature | 220 | 231 | - | - | |
Seca7g02941 | 698 | FunFam | Plasma membrane ATPase | 78 | 225 | - | - | |
Seca7g02941 | 698 | Gene3D | - | 327 | 593 | - | - | |
Seca7g02941 | 698 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 68 | 74 | IPR018303 | - | |
Seca7g02941 | 698 | NCBIfam | HAD-IC family P-type ATPase | 301 | 416 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Seca7g02941 | 698 | PRINTS | H+-transporting ATPase (proton pump) signature | 182 | 200 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Seca7g02941 | 698 | PRINTS | H+-transporting ATPase (proton pump) signature | 298 | 314 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Seca7g02941 | 698 | PRINTS | H+-transporting ATPase (proton pump) signature | 326 | 342 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Seca7g02941 | 698 | PRINTS | H+-transporting ATPase (proton pump) signature | 357 | 382 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Seca7g02941 | 698 | PRINTS | H+-transporting ATPase (proton pump) signature | 507 | 528 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Seca7g02941 | 698 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 4 | 630 | - | - | |
Seca7g02941 | 698 | FunFam | ATPase 4 plasma membrane-type | 310 | 562 | - | - | |
Seca7g02941 | 698 | NCBIfam | plasma-membrane proton-efflux P-type ATPase | 2 | 553 | IPR006534 | GO:0008553|GO:0016020|GO:0120029 | |
Seca7g02941 | 698 | SUPERFAMILY | HAD-like | 62 | 373 | IPR036412 | - | |
Seca7g02941 | 698 | Gene3D | - | 1 | 79 | - | - | |
Seca7g02941 | 698 | SFLD | p-type atpase | 48 | 378 | IPR044492 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g02941 | Seca-Chr7 | 84038682 | 84042584 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g02941 | 1 | 698 | Primary Pumps ATPases | AT2G24520 | 84.097 | 0.0 | 1220 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g02941 | K01535 | - | gmx:100791692 | 1234.17 |