Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02897 ATGTGGTTGCAAAAGAATAATTGGGAAAAGAAGGATGGTGTCAATGGAATAGTGGCAGTTGCAATAGACACAGATAAGGGGAGCCAGAATGCACTTAAATGGGCCATTGACAATCTCCTAACAAAAGGTGCAACTGTAGTTCTCATCCATGTCAGGCATAAGTCATCTTCATTTTCTGGATCAACCCCAAGGGCAGGGAAAAATGGTATTGGTGAGCAGGGTCCATTGGTATGCAAAGACCCTGATGATCACACCAAAGAAATTTTTCGCCCTTACCGTGTCTTCTGTGCACGAAAAGATATACAATGCAAGGACGTGGTACTAGAAGATGTAGACATAGCCAAAGGTTTAATTGAATATGTTTCTCAAGCAGCAATTGAGCATTTGGTTATAGGCTCTACAAACAAAACTGGTTTTCTTAGAAGATTCAAGGTAGCTGATGTTCCAGGAACAGTATCAAAAGGGGCACCTGATTTCTGTACAGTATATGTTGTTGGAAAAGGAAAGATTCAAACCATGAGATCTGCTTCTCGTCCTGCTCCTGCCTTTTCCCCTCTGCAAAACCAGTTTAGTCAAGCCAGTACCAGGTCAGATCAATCAGACCCACGTGTGCCTCTGGCTAATAGTGTGAAAGGATCTGAGAGGCGGTCATTTGATGCACCCCGTAGATCACAGGATGGGACAGATTCCTTCAGGTCACCATTGACTAGGAGAGGTGTGCATGACAAGTCATATGGGGATCTTTCCTTGCCAGATACTGACATAACCTTTGTAAGCTCAGGAAGGTCAAGTACAGACCGCCTATTCCCTTCCTATGGTAACCATCAGCTGTACCACTCAGAAACAGGCATATCCAACCCTCGTCTATCATATAGCTCCGATGCTGATGGAAACTATAGCTTTGAGTCAATGCATTATGGAAGAAAGTCTATGGATATAGGCTCTCCTGATTTCTCTTCTTTCTCTCATGATAGTGAGGGCTTATCATCTGCTTCTACATCACAAGGCATGGATGATGTGGAGGCTGAAATGAGGAGATTGAAGTTGGAGCTTAAGCAAACAATGGAAATGTATAGCACAGCTTGTAAAGAAGCACTCACAGCACAGCAAAAGGCTGTAGAACTACAGCGTTGGAAATTAGAGGAAGAGAGGAGATTGGAGGAAGCAAGGCTGGCTGAAGAAACTGCATTGGCAATTGCAGAAAAGGAGAAAGCCAAATCAAAGGCAGCCATTGAGGCTGCTGAAGCACAAAAGAGGATTGCAGAGTTGGAAGCACAGAAGAGAATTAATGCAGAAATGAAAGCACTTAGAGAAGCAGAGGAGAAAAGAAAAGCAGTTGATGCTTTGGCACATAGAGATTTCAGGTATAGAAGGTATGCAATTGAGGAGATTGAAGCTGCAACAAATTTTTTTGCTGAGTCCTTGAAGATTGGAGAAGGGGGTTATGGTCCAGTTTTTAAATGCCATCTGGATCATACACCTGTTGCAGTGAAGGTTCTACGTCCTGATGCAGCACAAGGGAGGTCACAGTTTCAAAGAGAGGTTGAAATATTGAGCTGCATTAGGCATCCAAACATGGTTCTCCTTTTGGGAGCCTGCCCGGAGTATGGCTGCCTTGTATATGAGCACATGTCAAATGGAAGCTTAGATGACTGCCTCTTTTGTAGAGGAAACACTCCCCCAATTCCATGGCAGCTGAGGTTCAAAATTGCAGCTGAAATTGGCACTGGCTTGCTGTTCCTCCACCAGACAAAACCTGAGCCTCTGGTGCATAGAGACCTGAAACCAGCCAACATCTTGCTTGACCGCAATTATGTGGCTAAGATCAGTGATGTAGGTTTGGCAAGGCTAGTTCCACCATCTGTTGCAGATACTGTGACACAATACCGCATGACAGCAACTGCTGGAACTTTCTGTTACATAGATCCTGAGTACCAGCAGACAGGAATGTTAGGGGTTAAATCTGACATATACTCTCTTGGGATCATTTTCTTGCAAATATTGACAGGAAGACCACCAATGGGTTTGACACATCATGTTCAAAGAGCCATTGAGAAGGGAACATTTGCTGACATGTTGGATCCTAAAGTGCCAGATTGGCCTGTGGAAGATGCCTTGGTCCTTGCAAAGATGGCAATCAAATGTGCTGAGTTAAGGCGTAAAGACAGACCTGATCTTTGCAAGGAGGTCCTTCCAGAACTAGAGAGGCTAAGAGCACTTGCTGAAAGTAATGATCACTATCCATCATTGAGTGGATACGTGAGCCCATCTAATCAGAGCCAAGTTTCTCTTCAACTGGATGGAGCGAGTTCTCCACTTGCTTATTCTGGGGAGAGCTCAAGAAACACATCAAGCCCTGTTTGA 2364 0.4429 MWLQKNNWEKKDGVNGIVAVAIDTDKGSQNALKWAIDNLLTKGATVVLIHVRHKSSSFSGSTPRAGKNGIGEQGPLVCKDPDDHTKEIFRPYRVFCARKDIQCKDVVLEDVDIAKGLIEYVSQAAIEHLVIGSTNKTGFLRRFKVADVPGTVSKGAPDFCTVYVVGKGKIQTMRSASRPAPAFSPLQNQFSQASTRSDQSDPRVPLANSVKGSERRSFDAPRRSQDGTDSFRSPLTRRGVHDKSYGDLSLPDTDITFVSSGRSSTDRLFPSYGNHQLYHSETGISNPRLSYSSDADGNYSFESMHYGRKSMDIGSPDFSSFSHDSEGLSSASTSQGMDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKLEEERRLEEARLAEETALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRINAEMKALREAEEKRKAVDALAHRDFRYRRYAIEEIEAATNFFAESLKIGEGGYGPVFKCHLDHTPVAVKVLRPDAAQGRSQFQREVEILSCIRHPNMVLLLGACPEYGCLVYEHMSNGSLDDCLFCRGNTPPIPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTGRPPMGLTHHVQRAIEKGTFADMLDPKVPDWPVEDALVLAKMAIKCAELRRKDRPDLCKEVLPELERLRALAESNDHYPSLSGYVSPSNQSQVSLQLDGASSPLAYSGESSRNTSSPV. 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02897 787 MobiDBLite consensus disorder prediction 317 337 - -
Seca7g02897 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Seca7g02897 787 MobiDBLite consensus disorder prediction 176 246 - -
Seca7g02897 787 MobiDBLite consensus disorder prediction 56 75 - -
Seca7g02897 787 Gene3D Transferase(Phosphotransferase) domain 1 544 750 - -
Seca7g02897 787 CDD STK_N 17 168 - -
Seca7g02897 787 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 163 - -
Seca7g02897 787 MobiDBLite consensus disorder prediction 751 787 - -
Seca7g02897 787 FunFam U-box domain-containing protein 51 544 744 - -
Seca7g02897 787 Gene3D Phosphorylase Kinase; domain 1 449 543 - -
Seca7g02897 787 Pfam Universal stress protein family 18 157 IPR006016 -
Seca7g02897 787 ProSiteProfiles Protein kinase domain profile. 471 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02897 787 Pfam Protein kinase domain 474 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02897 787 Gene3D HUPs 17 165 IPR014729 -
Seca7g02897 787 MobiDBLite consensus disorder prediction 317 338 - -
Seca7g02897 787 SUPERFAMILY Protein kinase-like (PK-like) 454 726 IPR011009 -
Seca7g02897 787 Coils Coil 397 443 - -
Seca7g02897 787 Coils Coil 363 383 - -
Seca7g02897 787 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 443 543 - -
Seca7g02897 787 MobiDBLite consensus disorder prediction 177 206 - -
Seca7g02897 787 Coils Coil 337 357 - -
Seca7g02897 787 PANTHER OS02G0152300 PROTEIN 18 770 - -
Seca7g02897 787 SMART serkin_6 471 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02897 Seca-Chr7 82133863 82141302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02897 1 764 Receptor kinase-like Gene Family AT1G78940 56.460 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Seca7g02897 Pkinase 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02897 - - gmx:100779981 1154.81