Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02890 ATGCCTAGAGGAAGTTTAGAACATCATCTCTTTAAGAGATTGTTGCCCCTTCCATGGTCTATCAGACTGAAAATTTTGATTGGTGCTGCAAAGGGCCTTACTTTTCTGCATGAGGAAGATACAAAGCCATTAATTTATCGAGACTTCAAAACTTCTAACATCCTATTGAATTTGGACTACAGTTTGAAACTTTCTGATTTTGGGTTGGTGAAAGATGCCCCAGTGGGTGACTTGACTCATGTGTCAACTAGAGTGATGGGAACTCAAGGGTATGCAGCCCCTGAGTATGTGATTACAGGAGCACACATGGTAATGAGGTTGACCTATTTGTGCCTTTCAATAGGTCCCAAATCACGACCACTCATGAGTGAGGTTGTTCGGGGACTACAGTGTGCCTCCCAGTATACAGACTTAGCATGTGCCTCACCGTCCTATCATCACATCATGAAACAAGGACAAGTTCAAGGTGCCCCTTCTTTTTCCAACTCAAAACCAGCCTCGACTAATAATATTGCTACCAACAAATATGGGCTAATAATTGGGTCATCAGCCGAGAGCACGCCAAGTCACTTTCAAGCCTCTACATTGAGTTCTACCCATCCTTTTCCTTCACCCCAACCTAGTGCTGGTGTTGGGTGA 639 0.4397 MPRGSLEHHLFKRLLPLPWSIRLKILIGAAKGLTFLHEEDTKPLIYRDFKTSNILLNLDYSLKLSDFGLVKDAPVGDLTHVSTRVMGTQGYAAPEYVITGAHMVMRLTYLCLSIGPKSRPLMSEVVRGLQCASQYTDLACASPSYHHIMKQGQVQGAPSFSNSKPASTNNIATNKYGLIIGSSAESTPSHFQASTLSSTHPFPSPQPSAGVG. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02890 212 PANTHER OS01G0588500 PROTEIN-RELATED 1 102 - -
Seca7g02890 212 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
Seca7g02890 212 Pfam Protein kinase domain 21 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02890 212 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Seca7g02890 212 SUPERFAMILY Protein kinase-like (PK-like) 1 142 IPR011009 -
Seca7g02890 212 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02890 212 MobiDBLite consensus disorder prediction 190 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02890 Seca-Chr7 81989008 81990095 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02890 1 100 Glycoside Hydrolase AT3G07070 56.311 7.28e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca7g02890 Pkinase 5.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02890 - - pop:7472558 170.244