Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02885 ATGACTAAGATAGAAGCTGCGATGAAGCACTACGATGAATTTGTAGAAGAAATGACTAAGATAGAAGCTGCAGTAGTTCCTGGATATCCCACCTCTTCTTTATGCACGGAGATGGTTGACAACATGCAGGGTCATGATGGATGCAAAAAGAGTCCCGCCACTGCCAAGGGTTCTAATCAGGAGAGGAAGAAAGTGGTTCGTTGGACAAAAGAGGAGCATGAACGCTTTCTGGTGGGACTTGAGAACTATGGCAAAGGGCATTGGAAAAATATAGCTCGCAATTTTGTAAGGACAAAGACTCCTACCCAAGTGGCAAGCCATGCTCAAAAGTACTTCCTAAGGCAAAAGCTTTCCGGAGGGAAAGATAATAAAAGGAGGTCTAGTATCCATGATATCACCACTGACAATCTTACAGAACCTACAACTAATTCAGGTCAAGACAAGCCTCTTTTGTTCATTGAGTCTCTCATTCCAATTGTGCAACCAGAAGGGATTAATCACCTCATTGAGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGACAAATGTGCAACCAGAAGAGATTAATCACCTCAATGAGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGACAAATGTGCAACCAGAAGGGATTAATCACCTCAATGAGGAGCCACTCATGGAGGTTTTCAATCTAAATTATGAGTCTCTCATAACAAATGTGCAACCAGAAGGGATTAATCACCTCAATGAAGAGCCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGACAAATGTGCAACCAGAAGGGATTAATCACCACAATGTGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGATGAAATGTTCATGTTTCCCTCATCTGATATCTATTCCGAGACCCTCAAGTTTCAAGGTCAGCAGGATCTAGACAAATGTCTTTTTCATCATGCTTATGCCCAGCAAAATGCTCAAGGTTTCGGAACCACTTCTAATGACTTCAATAAGGACGCTGGTTTTGGGTTTTGGTGA 1053 0.4188 MTKIEAAMKHYDEFVEEMTKIEAAVVPGYPTSSLCTEMVDNMQGHDGCKKSPATAKGSNQERKKVVRWTKEEHERFLVGLENYGKGHWKNIARNFVRTKTPTQVASHAQKYFLRQKLSGGKDNKRRSSIHDITTDNLTEPTTNSGQDKPLLFIESLIPIVQPEGINHLIEEPLMEVFNPNYESLMTNVQPEEINHLNEEPLMEVFNPNYESLMTNVQPEGINHLNEEPLMEVFNLNYESLITNVQPEGINHLNEEPLMEVFNPNYESLMTNVQPEGINHHNVEPLMEVFNPNYDEMFMFPSSDIYSETLKFQGQQDLDKCLFHHAYAQQNAQGFGTTSNDFNKDAGFGFW. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02885 350 FunFam transcription factor MYB1R1 66 117 - -
Seca7g02885 350 SUPERFAMILY Homeodomain-like 61 116 IPR009057 -
Seca7g02885 350 NCBIfam myb-like DNA-binding domain, SHAQKYF class 63 115 IPR006447 GO:0003677
Seca7g02885 350 CDD SANT 67 112 IPR001005 -
Seca7g02885 350 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Seca7g02885 350 ProSiteProfiles SANT domain profile. 67 116 IPR017884 -
Seca7g02885 350 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 5 217 IPR043363 -
Seca7g02885 350 SMART sant 64 114 IPR001005 -
Seca7g02885 350 ProSiteProfiles Myb-like domain profile. 60 112 IPR001005 -
Seca7g02885 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 116 IPR017930 -
Seca7g02885 350 Gene3D - 66 117 - -
Seca7g02885 350 MobiDBLite consensus disorder prediction 117 132 - -
Seca7g02885 350 MobiDBLite consensus disorder prediction 116 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02885 Seca-Chr7 81851924 81853170 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g02885 Myb_DNA-binding 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02885 - - gmx:100783469 194.512