Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02869 ATGGAAATTGAAAGTCTGCCAAATTGGTTTGATGAAGAGATGTACCGCACAGAATGTACTAGTGAAGAGAACATTGTCCTTGATGTGATGAAGCACTGGGATGAATTTGAAGAAGAAATGACTAAGATAGATGAATTTGTAGAAGAAATGACTAAGATAGAAGCTGCGATGAAGCACTACGATGAATTTGTAGAAGAAATGACTAAGATAGAAGCTGCAGTAGTTCCTGGATATCCCACCTCTTCTTTATGCACGGAGATGGTTGACAACATGCAGGGTCATGATGGATGCAAAAAGAGTCCCGCCACTGCCAAGGGTTCTAATCAGGAGAGGAAGAAAGTGGTTCGTTGGACAAAAGAGGAGCATGAACGCTTTCTGGTGGGACTTGAGAACTATGGCAAAGGGCATTGGAAAAATATAGCTCGCTATTATGTAAGGACAAAGACTCCTACCCAAGTGGCAAGTCATGCTCAAAAGTACTTCCTAAGGCAAAAGCTTTCTCGAGGGAAAGATAATAAAAGGAGGTCTAGTATCCATGATATCACCACTGACAATCTTACAAAACCTACAACTAATTCAGGTCAAGACAAGCCTCTTTTGTTCAATGAGTCTCTCATGACAAATGTGCAACCAGAAGGGATTAATCACCTCATTGAGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGACAAATGTGCAACCAGAAGGGATTAATCACCTCAATGAGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGACAAATGTGCAACCAGAAGGGATTAATCACCTCAATGAGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATAACAAATATGCAACCAGAAGGGATTAATCACCTCAATGAAGAGCCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGACAAATGTGCAACCAGAAGGGATTAATCACCACGATGTGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGATGAAATGTTCATGTTTCCCTCATCTGATATCTATTCCGAGACCCTCAAGTTTCAAGGTCAGTAG 1092 0.4103 MEIESLPNWFDEEMYRTECTSEENIVLDVMKHWDEFEEEMTKIDEFVEEMTKIEAAMKHYDEFVEEMTKIEAAVVPGYPTSSLCTEMVDNMQGHDGCKKSPATAKGSNQERKKVVRWTKEEHERFLVGLENYGKGHWKNIARYYVRTKTPTQVASHAQKYFLRQKLSRGKDNKRRSSIHDITTDNLTKPTTNSGQDKPLLFNESLMTNVQPEGINHLIEEPLMEVFNPNYESLMTNVQPEGINHLNEEPLMEVFNPNYESLMTNVQPEGINHLNEEPLMEVFNPNYESLITNMQPEGINHLNEEPLMEVFNPNYESLMTNVQPEGINHHDVEPLMEVFNPNYDEMFMFPSSDIYSETLKFQGQ. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02869 363 FunFam transcription factor MYB1R1 115 166 - -
Seca7g02869 363 ProSiteProfiles SANT domain profile. 116 165 IPR017884 -
Seca7g02869 363 SMART sant 113 163 IPR001005 -
Seca7g02869 363 SUPERFAMILY Homeodomain-like 110 165 IPR009057 -
Seca7g02869 363 NCBIfam myb-like DNA-binding domain, SHAQKYF class 112 164 IPR006447 GO:0003677
Seca7g02869 363 Pfam Myb-like DNA-binding domain 116 161 IPR001005 -
Seca7g02869 363 ProSiteProfiles Myb-like domain profile. 109 161 IPR001005 -
Seca7g02869 363 MobiDBLite consensus disorder prediction 182 197 - -
Seca7g02869 363 CDD SANT 116 161 IPR001005 -
Seca7g02869 363 Gene3D - 115 166 - -
Seca7g02869 363 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 37 231 IPR043363 -
Seca7g02869 363 MobiDBLite consensus disorder prediction 168 197 - -
Seca7g02869 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 165 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02869 Seca-Chr7 81717101 81718386 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g02869 Myb_DNA-binding 7.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02869 - - gmx:100783469 200.29