Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02837 ATGTCCATGGATCTAAAGAAATCTAACAAGATCAGAGAAATTGTTAGACTTCAACAGATCCTCAAGAAATGGAGAAGGATAGCCAACTCTTCAAAAACAACCACCAACACCAGCAGCACTAGCAGTAAAAGCATCAAGTTTCTTAAAAGAACACTTTCTCTGTCTGAACGTGAGGGAAGTTCAAGCAATGCTGCAGTTCCAAAAGGGTACCTAGCTGTTTGTGTTGGTGAAGAGCTTAAGAGGTTCATTATACCAACTGATTATTTGGGTCATGAGGCCTTTCAGATTCTCCTGAGAGAAGCAGAGGAAGAATTTGGGTTTCAACAAACAGGTGTTTTGAGGATTCCTTGTGAAGTATCTGTCTTTGAGAGTATCTTGAAGATAGTGGAAGGAAAAAAGGACAAGTTTTCATCTCAGGAATGCAGACTCAGCATTGAAGAAATGATGGGATTCTGCTCTTTAGAAAACCAAATTGCTTATTCTCACCATCCTCAAAGTCCATTGTGCAGATAA 513 0.3957 MSMDLKKSNKIREIVRLQQILKKWRRIANSSKTTTNTSSTSSKSIKFLKRTLSLSEREGSSSNAAVPKGYLAVCVGEELKRFIIPTDYLGHEAFQILLREAEEEFGFQQTGVLRIPCEVSVFESILKIVEGKKDKFSSQECRLSIEEMMGFCSLENQIAYSHHPQSPLCR. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02837 170 Pfam Auxin responsive protein 23 128 IPR003676 GO:0009733
Seca7g02837 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 46 125 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02837 Seca-Chr7 80232001 80232513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02837 3 170 Calmodulin-binding Proteins AT2G24400 53.403 7.60e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02837 K14488 - gmx:100799598 266.159