Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02763 ATGATTAATAGGAGGACTACTGGCCCAACTAGGCGTTCTACGAAAGGGCAATGGACACCGGAGGAGGATGAGATCTTGCGGAATGCTGTTCAGCGTTTTAAAGGAAAAAATTGGAAAAAAATAGCGGAATGTTTCAAGGATAGAACTGATGTACAATGCCTACATAGGTGGCAGAAAGTCTTAAATCCTGAACTTGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAGTAATTATTGAATTGGTGAACAAATATGGGCCCAAAAAATGGTCAACTATTGCACAACATTTACCTGGACGAATTGGTAAGCAATGTCGGGAAAGGTATGGTTATTGGATTTTTTTACTAATTCTTTCATGTCTTATTTGA 369 0.3875 MINRRTTGPTRRSTKGQWTPEEDEILRNAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEVIIELVNKYGPKKWSTIAQHLPGRIGKQCRERYGYWIFLLILSCLI. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02763 122 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 120 IPR017930 -
Seca7g02763 122 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 15 109 - -
Seca7g02763 122 SMART sant 66 115 IPR001005 -
Seca7g02763 122 SMART sant 14 63 IPR001005 -
Seca7g02763 122 Gene3D - 14 66 - -
Seca7g02763 122 CDD SANT 69 113 IPR001005 -
Seca7g02763 122 FunFam Transcriptional activator Myb isoform A 67 113 - -
Seca7g02763 122 CDD SANT 18 61 IPR001005 -
Seca7g02763 122 ProSiteProfiles Myb-like domain profile. 62 113 IPR001005 -
Seca7g02763 122 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 61 IPR017930 -
Seca7g02763 122 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Seca7g02763 122 FunFam Transcriptional activator Myb isoform A 14 66 - -
Seca7g02763 122 SUPERFAMILY Homeodomain-like 41 112 IPR009057 -
Seca7g02763 122 Gene3D - 67 113 - -
Seca7g02763 122 Pfam Myb-like DNA-binding domain 18 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02763 Seca-Chr7 76266555 76268034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02763 5 109 MYB Transcription Factor Family AT4G32730 87.619 2.87e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca7g02763 Myb_DNA-bind_6 1.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02763 - K09420 gmx:100811335 224.172