Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02751 ATGGCTTCAGTTTCCATCGAGAGGCTCATCGGAGGAAAATATAAAATCGGTCGGAAAATTGGGAGTGGATCATTCGGTGAAATTCATATTGGGGCGCATGTAGAAACCTCTGAGATTGTGGCCATCAAGATGGAGAACAGGAAAACCCAACATCCGCAGCTACTGTATGAGGCCAAGATATATAGTATTCTTCAAGGAGGAAGTGGTATTCCAAGAATAAAATGGTGTGGTACTGAACGAGACAACAACCTTCTAGTTATTGAACTTTTGGGACCAAGTCTTGAAGACCTCCTTTTCTTCTGTGGTGGGAAGTTTTCACTAAAAACAGTTTTGATGTTGGCTGATCAGATGCTTACGAGGATAGAATATTTACATTCCAAGGGATTCCTGCATAGGGATATCAAACCAGATAACTTCCTTATGGGTCTTGGGAGGAAAGCAAATCAGGTTTTTATGATTGATTTTGGACTTGCAAAAGGATATAGGGACCCTTATACAAATAAACATATCCCTTACAGAGAGAACAAAAACTTAACAGGGACTGCACGTTATGCAAGTTGCAATTCTCACAAAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGTTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGCAAGCTGCCACCAGAATGCAAAAATATGACAAAATTCGCAAAATGAAGTTATCAACTCCCACTGAGGTACTTTGCAAGTCATGTCCTGCGGAGTTCGCTTCTTACTTTCATTATTGCCACTCTTTGAAATTTGATCAAAGGCCAGATTATGGATTTTTGAAGCGCCTGTTTCGCAATTTGTTCACGTGTCAAGGATATGATTCTGACTCTTTATTTGACTGGACAATTTTAAAATCTCAGCAGATGCAACAGGCAAAGACACAAACTCAATCAACTGTTCGTAATTCCTTGGCCCAGTTTGCTCCAGTTGCTGTGCCTAGCAGTCTTGAACCAGGGGATATGGATAAGCATAAAGAAGTCAATGGTTCCATTCAAAATGCCGTGGCAAAACCATCTTCAATCTATTGTGACCGTCCACGTGTTTGTGTGAAGATTAGGGCACCCAATGTTCAGAATCTCAATGGCAAGGTTCAGACAGAGAAACATACTCTGAATGTTGGTTCATCTATTTCCTCTGCCATGCCCAGAGCCTCTACAGATAATATCTCACAACCCAGCAGGCCTGAAGGAACCTCAAACCCGGGTCACCTATTAGGGAGTATATCCGGTGCTTCGGGCAGCTTTGTTCCTTCACTACGCCGAGTTTCATCAACCAAAGAGTAG 1326 0.4208 MASVSIERLIGGKYKIGRKIGSGSFGEIHIGAHVETSEIVAIKMENRKTQHPQLLYEAKIYSILQGGSGIPRIKWCGTERDNNLLVIELLGPSLEDLLFFCGGKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGRKANQVFMIDFGLAKGYRDPYTNKHIPYRENKNLTGTARYASCNSHKGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAATRMQKYDKIRKMKLSTPTEVLCKSCPAEFASYFHYCHSLKFDQRPDYGFLKRLFRNLFTCQGYDSDSLFDWTILKSQQMQQAKTQTQSTVRNSLAQFAPVAVPSSLEPGDMDKHKEVNGSIQNAVAKPSSIYCDRPRVCVKIRAPNVQNLNGKVQTEKHTLNVGSSISSAMPRASTDNISQPSRPEGTSNPGHLLGSISGASGSFVPSLRRVSSTKE. 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02751 441 SMART serkin_6 14 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02751 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Seca7g02751 441 MobiDBLite consensus disorder prediction 388 441 - -
Seca7g02751 441 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Seca7g02751 441 ProSiteProfiles Protein kinase domain profile. 14 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02751 441 PANTHER CASEIN KINASE-RELATED 12 326 - -
Seca7g02751 441 Pfam Protein kinase domain 14 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02751 441 SUPERFAMILY Protein kinase-like (PK-like) 9 295 IPR011009 -
Seca7g02751 441 FunFam CK1 family protein kinase 6 331 - -
Seca7g02751 441 Gene3D Transferase(Phosphotransferase) domain 1 2 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02751 Seca-Chr7 75424418 75437779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02751 12 254 CBL-interacting serine-threonine protein kinases AT4G24400 27.888 9.67e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Seca7g02751 Pkinase 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02751 K08960 K08959 gmx:100782913 639.417