Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g02719 | ATGATAATTAAAAAGAACCTGAAATCTGAAATGCCGAGTCTGAAACGGCACAGACTCGGCGACTCGGAGGACGACGAGTCCGCCTCGGCGACTCGGAAGGACAAGAAGAGAAAGACGAACGAGCAATACCCGTTGAATCTCCTCACCGGCGCAATCCCGGCGAACATACTCGGCGCGGTGGAGCCGGAGAAGGACTTCCTGACACCGCTCAACTCGAAGGAGGAGCATGGAGCCGACAAGAAGAACGTGTCGAGGCCGCCGGTGGTTCGGAGTTCGCGCGGCCGTGCGCAGGTTCTGCCGTCGAGGTTCAACGATTCGGTTATGGACGATTGGAGGAAGGACAGCAAGAGCGTCACTAACATACCTGCATTCGACAAAGAGCTCGGTTTAAAAGCAACGAAAACTGGCAGCGGAAAAGGGAAGAAAGCAGAGAGAACAACCGGCCACAAGCCTGGGAGGTATTCCGTTTTGTGCGAGGAGGTGCTGCATAAGAATTTCAGTGCTGCAGCGAGCAAGGACTTGAGTTTGCGCGAGGAGTTTATGGTTTGTAAGGGTAATGAAGGAGTTTTGAAGAAGGAGGAGAAGAAAGATGAGTCGAATGGACCCCACGACTTTTATGCGGGTGATATAGTGTGGGCCAAGGCAGGAAAGAATCAACCTTTTTGGCCTGCCATTGTCATTGATCCTATGTCTCAGGCACCTGAGCAGGTCTTGAGGTCATGCATAGCTGATGCTGCTTGTGTTATGTTTCTTGGGTACTCTGAGAATAAAAATCACAGGGACTATGCATGGGTGAAGTATGGGACGATTTTTCCATTTCTGGATTATACAGACAGGTTTAAGGAGCAGCTTGAATTGAGTAACTGTAATATTTCTCAATTTCAAACCGCAATGGAGGAGGCGATCATGGCAGATCAGGGTTTCACAGAGAACCTGATAGCAGAGATAAATACAGCAGCTGCTAACAATGGTTCCCGTGATTTCCTGAATCTGAAGCAGGAATGTGATAAGAAAGACTCACAACCTTGTGAAGTATGTGGATTGGACCTTCCATTAAAAATGTCAAAGAAAACAAAGGATTTGAATCCTGGTGGTCAATTCCTATGTAAAAAATGTGCCAGGTTAACAAAATCAAAACATTATTGTGGCATATGTAAGAAAATTTGGAATCATTCAGATAGCGGAAGTTGGCTGCGCTGTGATGGATGCCAAGTGTGGGTGCATGCCGAATGCGAAAAAATCTCCAGCAACATTTTCAAGAATCTTGGAGGCACTGATTATTTTTGCCCTACTTGCAAAGTGAAGTTTAGTTTTGAGTTATCTTATTCAGAAAAATCACAGCCTAAAGTCAAATGGAACAAAAACAATGGGCAGCTAGTGCTTCCAAACAAGGTCACTGTTCTCTGCAATGGTGTGGAAGGCATATATTTTCCAAGCCTTAACCTAGTTGAGTGCAAGTGTGGTTTTTGTGAGACTGAAAAGCAAGCACTTGCTGAATGGGAACGCCACACAGGTTCCAAATTTAGAAATCGGAGAACAAGTATTCAGATTAAAGGATCCATGCAATCGCTGGAACAATGGATGCTGCAAGTGGCAGAGTTTCATGCTAATGCTGTAGTTTCTGTCAAACCTAAAAAACCTTCCGCAAAAGAAAGGAAACAGAAGTTGCTTTCGTTTCTGCAAGAGAAGTATGAACCTGTTTGTGCTAAGTGGACTACAGAACGATGTGCTGTATGTAGATGGGTTGAGGATTGGGACTACAACAAAATTATCATCTGCATTAGATGTCAAATAGCTGTTCATCAAGAATGCTATGGAGCAAGAAATGTTCGAGACTTTACATCATGGGTTTGCAAAGTTTGTGAAACACCCGAGATCAATCGGGAGTGTTGTCTTTGTCCTGTAAAAGGTGGTGCTCTAAAGCCAACTGATGTCGACACATTATGGGTTCATGTCACTTGTGCTTGGTTTCGACCTGAAGTCGGTTTTGCTAGTGATGAGAAGATGGAGCCTGCTTTGGGTATTTTGAGTATTCCATCAAATTCTTTTGTGAAGATGTGTGTTATTTGTAAGCAAATTCATGGTTCGTGCACACAATGTTGCAAGTGCTCCACTTATTTCCATGCCATGTGTGCATCGAGGGCTGGTTATCGCATGGAGTTATTACCAGTCACCTTTGTAGAACTTCCCCTTCCATTCCTGTTGCATTGTTCGGAGAAAAATGGTAAACAGACAACAAAAATGGTTTCTTATTGTGCTTTCCACAGGGCTCCCAATCCAGACACTGTTTTGATTATGCAAACCCCTCTTGGAGTCATTTCAACCAAAAGTCTTATCCAAACTAAGAAAAAGACTGGGTCGAGGTTAATTTCATCAAACAGAAAAAAGGTAAAAGACACTCCTCCTGCAGACACTGGACATGACCCTTTTTCAGCTGCTAGGTGTCGTATCTTTCAAAGAACAAACCATACAAAAAAGAGAGCAGCAGATGAAGCCATTGCTCATCAAGTGAGGGGTTACTACCATCATCCTTTAGATGCAATACGGAGTTTAAATCCTAGCAAAGTGGTAAATGAGTCCCAGGCATTTTCTTCTTTTAGGGAACGCCTTTATCACTTACAGAGAACCGAAAATGAACGTGTTTGCTTTGGTAGATCAGCCATACATGGATGGGGCCTCTTTGCACGTAGAAATATTCAAGAAGGAGAAATGGTTCTTGAATATCGTGGTGAACAAGTGAGGGGCAGCATTGCAGATCTAAGGGAGGCGCGATATAGATTAGAAGGAAAAGACTGCTATCTATTCAAGATAAGTGAAGAAGTGGTAGTTGATGCCACTGAAAAAGGGAATATAGCGCGGCTAATTAACCATTCTTGTATGCCAAATTGCTATGCAAGGATCATGAGTGTGGGTGATGACGATAGCCGGATTGTGCTCATTGCCAAGACTGACGTTTCTGAAGGAGATGAGTTAACGTATGACTACTTGTTTGATCCTGATGAGCCAGATGAATTCAAAGTCCCTTGTTTATGTAAAGCTACAAACTGCCGGAAATTCATGAATTAG | 3066 | 0.4374 | MIIKKNLKSEMPSLKRHRLGDSEDDESASATRKDKKRKTNEQYPLNLLTGAIPANILGAVEPEKDFLTPLNSKEEHGADKKNVSRPPVVRSSRGRAQVLPSRFNDSVMDDWRKDSKSVTNIPAFDKELGLKATKTGSGKGKKAERTTGHKPGRYSVLCEEVLHKNFSAAASKDLSLREEFMVCKGNEGVLKKEEKKDESNGPHDFYAGDIVWAKAGKNQPFWPAIVIDPMSQAPEQVLRSCIADAACVMFLGYSENKNHRDYAWVKYGTIFPFLDYTDRFKEQLELSNCNISQFQTAMEEAIMADQGFTENLIAEINTAAANNGSRDFLNLKQECDKKDSQPCEVCGLDLPLKMSKKTKDLNPGGQFLCKKCARLTKSKHYCGICKKIWNHSDSGSWLRCDGCQVWVHAECEKISSNIFKNLGGTDYFCPTCKVKFSFELSYSEKSQPKVKWNKNNGQLVLPNKVTVLCNGVEGIYFPSLNLVECKCGFCETEKQALAEWERHTGSKFRNRRTSIQIKGSMQSLEQWMLQVAEFHANAVVSVKPKKPSAKERKQKLLSFLQEKYEPVCAKWTTERCAVCRWVEDWDYNKIIICIRCQIAVHQECYGARNVRDFTSWVCKVCETPEINRECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVGFASDEKMEPALGILSIPSNSFVKMCVICKQIHGSCTQCCKCSTYFHAMCASRAGYRMELLPVTFVELPLPFLLHCSEKNGKQTTKMVSYCAFHRAPNPDTVLIMQTPLGVISTKSLIQTKKKTGSRLISSNRKKVKDTPPADTGHDPFSAARCRIFQRTNHTKKRAADEAIAHQVRGYYHHPLDAIRSLNPSKVVNESQAFSSFRERLYHLQRTENERVCFGRSAIHGWGLFARRNIQEGEMVLEYRGEQVRGSIADLREARYRLEGKDCYLFKISEEVVVDATEKGNIARLINHSCMPNCYARIMSVGDDDSRIVLIAKTDVSEGDELTYDYLFDPDEPDEFKVPCLCKATNCRKFMN. | 1022 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g02719 | 1021 | Pfam | PWWP domain | 208 | 303 | IPR000313 | - | |
Seca7g02719 | 1021 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 376 | 436 | IPR013083 | - | |
Seca7g02719 | 1021 | ProSiteProfiles | SET domain profile. | 879 | 996 | IPR001214 | GO:0005515 | |
Seca7g02719 | 1021 | FunFam | Histone-lysine N-methyltransferase | 625 | 758 | - | - | |
Seca7g02719 | 1021 | SUPERFAMILY | FYVE/PHD zinc finger | 574 | 638 | IPR011011 | - | |
Seca7g02719 | 1021 | CDD | PHD_TCF19_like | 382 | 432 | - | - | |
Seca7g02719 | 1021 | ProSitePatterns | Zinc finger PHD-type signature. | 576 | 621 | IPR019786 | - | |
Seca7g02719 | 1021 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 1 | 1021 | IPR025780 | - | |
Seca7g02719 | 1021 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Seca7g02719 | 1021 | CDD | PHD_ATX3_4_5_like | 575 | 621 | IPR042011 | - | |
Seca7g02719 | 1021 | ProSiteProfiles | Post-SET domain profile. | 1005 | 1021 | IPR003616 | - | |
Seca7g02719 | 1021 | PANTHER | PHD FINGER PROTEINS | 28 | 453 | - | - | |
Seca7g02719 | 1021 | SMART | PHD_3 | 381 | 433 | IPR001965 | - | |
Seca7g02719 | 1021 | SMART | PHD_3 | 686 | 756 | IPR001965 | - | |
Seca7g02719 | 1021 | SMART | PHD_3 | 575 | 622 | IPR001965 | - | |
Seca7g02719 | 1021 | Pfam | PHD-finger | 588 | 622 | - | - | |
Seca7g02719 | 1021 | ProSiteProfiles | PWWP domain profile. | 207 | 276 | IPR000313 | - | |
Seca7g02719 | 1021 | FunFam | Histone-lysine N-methyltransferase | 854 | 1021 | - | - | |
Seca7g02719 | 1021 | CDD | ePHD_ATX3_4_5_like | 630 | 755 | IPR041955 | - | |
Seca7g02719 | 1021 | SUPERFAMILY | FYVE/PHD zinc finger | 380 | 438 | IPR011011 | - | |
Seca7g02719 | 1021 | Gene3D | SET domain | 775 | 1021 | IPR046341 | - | |
Seca7g02719 | 1021 | Gene3D | - | 192 | 317 | - | - | |
Seca7g02719 | 1021 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 568 | 624 | IPR013083 | - | |
Seca7g02719 | 1021 | CDD | PWWP_AtATX3-like | 206 | 310 | - | - | |
Seca7g02719 | 1021 | Pfam | SET domain | 890 | 995 | IPR001214 | GO:0005515 | |
Seca7g02719 | 1021 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Seca7g02719 | 1021 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 625 | 757 | IPR013083 | - | |
Seca7g02719 | 1021 | SMART | PostSET_3 | 1005 | 1021 | IPR003616 | - | |
Seca7g02719 | 1021 | CDD | SET_SETD1-like | 866 | 1017 | - | - | |
Seca7g02719 | 1021 | Pfam | PHD-finger | 381 | 434 | IPR019787 | - | |
Seca7g02719 | 1021 | SUPERFAMILY | Tudor/PWWP/MBT | 199 | 304 | - | - | |
Seca7g02719 | 1021 | SUPERFAMILY | SET domain | 869 | 1021 | IPR046341 | - | |
Seca7g02719 | 1021 | SMART | set_7 | 879 | 1002 | IPR001214 | GO:0005515 | |
Seca7g02719 | 1021 | Pfam | PHD-zinc-finger like domain | 629 | 755 | - | - | |
Seca7g02719 | 1021 | MobiDBLite | consensus disorder prediction | 70 | 95 | - | - | |
Seca7g02719 | 1021 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 627 | 756 | IPR034732 | - | |
Seca7g02719 | 1021 | ProSiteProfiles | Zinc finger PHD-type profile. | 379 | 435 | IPR019787 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g02719 | Seca-Chr7 | 72012495 | 72022932 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g02719 | 576 | 712 | C2H2 Transcription Factor Family | AT3G14740 | 37.241 | 6.17e-19 | 87.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Seca7g02719 | zf-HC5HC2H_2 | 1.4e-26 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g02719 | - | - | gmx:100808761 | 1538.09 |