Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02717 ATGTTTGCAGAGACTGGTCTTCTCTTCCCATATTTGCAGAATTTCTCTCAAGAGTTTCAACAACTTGAGGAGTACTGCATGACCCAGAAGTCCAATGCTTCAATGAGTGACCTTATTCAACCTTCTGCAATGTCAGAATATGATTTGTTAGTAGAGGGAGATCTATTCAAAGCACCTGAGCCTATTATTGAAGAACCAGTCATGGACCTCAATCCCATGCAAGCAGCCATGTCAATGATATCTTGTGGGGAAGATGTCTCCTCGCAGGGTCTAAAATCCTCAGATATTGATGTACTTCAAAAAGAACAGCTTCTGAGTGAGGTATACTATGAGTGTAAAAAGGATCTCTTAGAAAAGGCGGCAATAGAGTCACCGCTCTCTGAAATTCTGGAAATCAAGATTCCTGCTCTGAACATAGATGAGAATTTAATTCAAGAAAACAAACCTCTTCTTGACATACCTTTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGTTCTTTGGACTGGATGCATGGAGCTGCAATGAAGCCTGCTTTCCTTGATTTCCCTGGAATAGATTTCAATGCAGTTTATGGCATGCGGAGAGCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGTAATATGAACGTTGGGCAATCTCCCCTTGAGAGGCCATTTCTTCTCAGCAACTGCACGAGCGAGGAACGTCGAGAAAAGCTCTCCAGATATAGGAATAAGAAGACGAAGAGAAACTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGATAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACAGAAGAATTTGATGTCAAGAGGCAATGA 846 0.4161 MFAETGLLFPYLQNFSQEFQQLEEYCMTQKSNASMSDLIQPSAMSEYDLLVEGDLFKAPEPIIEEPVMDLNPMQAAMSMISCGEDVSSQGLKSSDIDVLQKEQLLSEVYYECKKDLLEKAAIESPLSEILEIKIPALNIDENLIQENKPLLDIPLPKSVSSGSLSSLDWMHGAAMKPAFLDFPGIDFNAVYGMRRAFSEGDIKTLGNGNMNVGQSPLERPFLLSNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDVKRQ. 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02717 281 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Seca7g02717 281 Pfam CCT motif 231 273 IPR010402 GO:0005515
Seca7g02717 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 165 273 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02717 Seca-Chr7 71985187 71990110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02717 206 275 C2C2-CO-like Transcription Factor Family AT5G57660 41.667 7.62e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca7g02717 CCT 7.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02717 - - aprc:113853022 467.233