Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02712 ATGTGTCTTCGAATCATAGGAGCTAGTAATAGACGATATGCTTATATTGGTGATATTGTCGTTGCTGTAATCAAAGAAGCAGTACCAAATACGCCTTTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAACGTAGCAATGGTATAATAATACAGTATGATGATACTGTTGCGGTTGTCATAATCTCGTTAAAGATGTGA 222 0.3514 MCLRIIGASNRRYAYIGDIVVAVIKEAVPNTPLERSEVIRAVIVRTCKELKRSNGIIIQYDDTVAVVIISLKM. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02712 73 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 70 IPR000218 GO:0003735|GO:0005840|GO:0006412
Seca7g02712 73 SMART Ribosomal_L14_2 1 71 IPR000218 GO:0003735|GO:0005840|GO:0006412
Seca7g02712 73 Pfam Ribosomal protein L14p/L23e 1 68 IPR000218 GO:0003735|GO:0005840|GO:0006412
Seca7g02712 73 ProSitePatterns Ribosomal protein L14 signature. 41 67 IPR019972 -
Seca7g02712 73 Gene3D Ribosomal protein L14 1 72 IPR036853 GO:0003735|GO:0005840|GO:0006412
Seca7g02712 73 SUPERFAMILY Ribosomal protein L14 1 68 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02712 Seca-Chr7 71184123 71184344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02712 14 68 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 34.545 9.76e-07 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02712 K02874 - gmx:3989333 123.635