Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02706 ATGGATGAACCGGGTGAGGAGTTCAGGAGATGCAGCAGAAGCGGGACAGGGGGGTGGAGGTGCAAGGAGAGGGCTGTGAGTGGAAGATCCCTCTGTGAGAAGCATCATCTGTATACCTTGCAGAGAAATAAGAAGCTAAAGGAAGGTGCTTCTGGGGGTGTTGGTGTAAACCAGAGAAAGAGAGGGAAAAAAAGAAAAGCTGAAGATGATTCAGAAAATGGGGTTGTGGGTGGAGTTATTGATGAGGGACGTAGAGAGTGGTTTGGTGATCACAATGGTGGTCCCAATGTCGTTGAGGAATTTGCAGGGCTTTTTGGTGAAGCTGAAGGGAATGGTGGGGAGAATGTTAGTCTAGGTTATGGGAGTTTTAACCCTTGGCACCAAGGAGAGGGTCAACAAATTAATGTGGGTGAATTTGGGGAAGGATGTGGAAATTTGGGTCAGGTTCTGGATGATGGACTTCAGTTTGAAGGTGGGTATGCTGAGGATATGAATGGAGTTGCTGGTTTGGGTCAGCCATGGAGCATTGCAGGTGTCTGTGGAAATGCTGGTGGCGTTTCTGATGCTGGTCAAGAAGATCATGGAAACGGGGCTAGTGGGGATGTTTGTGAAAATGGTCTTCTGGGTCTTCCTTCTGAAGGAATAGAAGGCCTGATTGGTGATGCTGCACTTGATAGTCTATATGATAGGGGTTTTCAAGCTCTTCTTTGTCAAGACAGGGGTTTTGAGGAGGATGTAATTTTCATTGGTGATGGCACAGGCTTTCAGGGGTTGAGTGGTGAAAATGCATATGAGTTTTGTGAAGTTGCTGGGTGTGAGGAAAATCCAGGTCAGTATGGTAAATTTGAAGTTGAAAATGTTGGTAGCATAGAATTACCTGTGTCAAATAACAAGATGACTGCTCTTGGCGTGGAAGAGGGAATGGAACTGTTATTAAGTGGAGGAGTGGCAGCTGATGAAGAGGCAAGAGGTGAAGCCTTGAGGCCGCTGGCTAAGAGAGGCCAGCCTAAGGGTGCCAAGAATATGAATAAACAGCTTAGCATAGCCTTGGATGGACAAACTGTTGGTGGAAATGATAATGCAGGAACAATTGGGATGAGCAGTGTCAGAGATTTAGAGACTGAAAGATCAGTGTTCTCTGATGAGAAAGACAAGGTTGGTGATGAAGATGCAGGTCCAGGTGAGATTGCAAGGCCAAAGAAGTGTGGTAAACCAAAAGGTCCAAAGAATAAGATGGGGAGTGTTGTGCATGTGAGTAATGAAGTTGCTATTAAGATTGCAGGACAAAAGATGCATTGTCGACCGAAGGCTTCAAAATGTAGTAAGAATATTGAGGTTAGTGATCAAGTTGCTGGTGAGATTGCAGGACCTAAGAAGCATGGTAGACCAAAGGGTTCAATAAATAAACAGAAGAATACTGTGGAAGTTAGTAATGATGCTGCTGGCGATGGTGAGATTGCAGGACCTAAGAAGCGTGGTAGACCAAAGGGTTCAAAAAATAAACAGAAGAATACTGTGGAGGTTAGTGGTGATGCTGCTGGTGATGGTGAGATTGCAGAACCTAAGAAGTGTGGTAGACCAAAGGGTTCAAAAAATAAACAGAAGAATACTGTGGAGGTTAGTAATGATGCTGCTGGTGATGGTGAGATTGCAGGACCTAAAAAGCGTGGTAGACCAAAGGGTTCAAAAAATAAACAGAAGAATACTGTGGAGGTTAGTAATGAAGTTGCTGATACTGGTAATGGTGAGATCACAAGACCGAAGAAGCGTGGTCGACCAAAGGGTTCAACAGAGAAGAAGCGTGGTCGACCAAAGGATTCGACAAAGAAAAGGAAGACTGCTGTGTGTACTGCTAGTAATGATGGAACTGGTGAAATTGCTAGACAAGGTTCAGGAAACAAAATGCTCAATATTCTGTGTCAAAAAGGTGAAGATGAGTTTGCAAGCCTAACTAATAAACTTGGTCCAGCAATGTGTACAAGAAATAAATTCAAGTGTTCTGTATTTGAGGGTCAGAACTATCCAGGGATGTTGAGTGATATTCACCTTGATGATGGTGGAGTCACAAATGTTTGGCCAAGTGGTTTGGAGAGTACTATATTGACTCCTTTATGTGAGCAAGAAAAAGGGATGCCTTCTAAAGCCACTGAAGATATTGAAAACAAAATGGAGATTACCCAACCAATAATTAAGCGTGGTCGACCTAAGGGCACAGGGAACAAGAAGGTAAAACTACCAGATCAGGACATGGCTGAAGTTATGTTTACTGATAAAGGAAGTGATATTTTCTTTGGTCCTATGGGATTGGGAAATTTCGCAACTTGTGCTGTGGGTGAGGAAAACATAGACCATGAAAGTGACACCATTGACCCAATTGATTTAAAAAATTACAAAGCCACTCTTGTTTGTGACAGGAATCAGGAAATGCCTATCCAAACCTTTGGTCAAGATGAGGTTCAAAATGATAGTGACTATGATAAACCAAAGCGGGGTCGACCGAAGGGGTCTAAAAATAAGAAGAAAAATATTGCTGGTGAAGCTGCAAGCAAGTTTGTTAAAGGGGGGAAAATGCGTGGCAGGCCAAAGGGTTCTAATAGAAAGGAAAAGGATAGTGGCTATCCTTTGGATTCACAGATTGAGAGGCATGGTATTGTAGCTGAGAATGATGGAAGAACTTCTGCAGAATCTTCCTCCAGAAATGATATTGATCTACAGAAAGGTAATCATAGCCAAGAAAGAGGTTTAAGAATTACGAGACACACCATTGAACACAGCCAATCAAGGCGTCTAGAAGGACACACACCAACTGATGTTGCTATAGAAGATGAGAATGAGCCAATGAAAGTTATACACAGATCCAGGATGAATGTAACAGGACAACCCTTACAAAATCAGAAGAGTACCCGTTTCAGCAAAGTTTTGAGTAGGATTGTGCCACAGAAGCATATACAGGAGGAATGCATTTCAATGCTAGAAGATAAAGTAAATAAGAAAAAAAAATTAAATTTTCTCGTGGATTGCTCAAACGATTCTGGAAATGAAAAGATGACAAAAGGATTGACATGTGAATTTGGTATTGTCCAAAAGAGGTCTAGTGAAAGACTGAGAACATTGTTAATCGAAGGCAAGAATTTTCAGGGTGTTGGAGTGGAAGAAACCACAGACCCTGGATTGGAATCTTCAGGTTTGATGGGTGATACAGGAAGGAAAAAGGATCCAAGGACTTTAAGGTGCCACCAGTGCTGGCAGAATGGTAGGAATGGGGTTGTCATATGTGCCAAGTGCAAAAGAAAGCAATATTGTTATGTGTGCATAACAAAATGGTACCCCGACAAAACTAGGGAGGAGATAGAGACTGCTTGTCCCTTTTGTCTTGGTATTTGCAATTGCCGATTGTGCTTGAAGAAAGATGTATCTGTAGTGTATCCACAGACTGAGAGTGGTGAAGCTGATACAGATGTCAAATTACAAAAGTTGCTGTACTTGCTTAGCAAAACTCTGCCTTTACTCCAACACATCCAACAGGAGCAGAGATCAGAATTGGAAATTGAAGCTAGCATACATGGTTCCCTATTGGTTGAAGAGGATATTCTGCAGTCGGTAATTGATGATGATGATCGAGTTTATTGTGACAATTGCAATACATCCATTGTCAATTTCCATAGAAGTTGTCCCAATCCTTATTGTAGGTATGATCTCTGCCTCACTTGTTGCATGGAACTAAGAAATGGTCTTCATTGTGAAGATATTTCAGCTAGTGACAATGAGGAAACAGTTGACACACCATCTGTAACTTCTTGGAGAGCAGAGATAAATGGCAGGATTCCTTGCCCTCCCAAAGCCAGAGGAGGGTGCGGTACTGCTATCCTTTCACTGAGGCGCCTTTTTGAAGCTAATTGGGTTGACAAATTGATTAGGAATATGGAGAAACTTACTATCAAATATCAGCCACCTATTGTTGATCTTTCTGTAGGATGTTTAGAGTGTAATAGTTTGGAGGATGATGGAACACAATATTCTGTAAGGAAGGCAGCGTCCAGAGAAACCAGTCATGATAACTTTTTGTACTGCCCAGATGCTGTTGAAATGGGAGACACAAAATTTGAGCATTTCCAAAGGCACTGGATAAGAGGTGAACCTGTTATAGTTAGGAATGTGTTTGAAAAGGCTAGTGGCCTAAGCTGGCATCCAATGGTGATGTGGAGAGCTTTTAGGGGTGCACAAAAGATAATGAAAGAGGAGGCAACTACTTTTAAAGCCATTGATTGCTTGGATTGGTGCGAGGTTAAAATGAACATTTTTCAGTTCTTCAAAGGATACTTGGAAGGTCGTAGGTACAGAAATGGATGGCCAGCGATGCTGAAGCTAAAGGATTGGCCTCCATCAAATTCTTTTGAAGAGTGTTTTCCGAGGCACGGTGCTGAGTTTACAGCTATGCTTCCTTTTAGTGACTACACCCATCCCAAATCTGGTATTTTAAATCTTGCGACAAAGCTCCCTGCTGTTTTGAAGCCAGATTTGGGCCCCAAAACATACATTGCTTATGGATCTTTGGAAGAATTAAGTAGAGGTGATTCTGTGACAAAACTACATTGTGACATTTCAGATGCGGTCAATATTCTGACACACACAGCTGATGTAAAGACACCACCATGGCAACCCAGAATCATAAAAAAGTTGCAGAAAAAGTATGAAGCTGAAGATTTGCGTGAGCTTTATGGCATGAATGATAAGGTAGTTGGTTCACATGGAAGAAAACAGAAAAAGTGTCGTGTAGGTAATAGCATGGATCCTAAAATCCATGAAAAAGAAGAGATTATTGGGAGAGACTCAACCTTACTTGGAAGTCGAGGAAAAGAAGAGAATGTTAATGGACAGCTAAGTAGATTACAGAGTTTAGGGAAATCAAGATCAGATAGGGCCGCTTGTGTTCAAGGATTCTCAGAATCCACCATAAGTAAATCATTATTAAATTCTGGTGAGCAGGCAATCCTCAATTTGAATACAGGGTTTCCAGAATTTAATCTCAATAATCATGATTCCAGTTGCTTGTTTCCAGGAAAAGATTGTGAGTGGACGCATTATAAAGTGAATAATGGTGAAAAATGGTGCTCATCACCAGGTGATGAATCTTGTATAGGAACATCATTACCAGAACGTATGGAGTTTAGGACATGCACAGATGAAGATTTTGAAAAGGGAAGAATGTTTGATATGCACCTAAGTAAAGAAAACTTTTGTTCCCTCCAAGATCAATCTGATACAGGTTCCTTATTTGTTGATTTGAACTTCCCCACTCCACCAGACAGGGTAAATCAGGAACATCAGAAAAATTGCATTGAACAATCTCAGTCCAAAAGCAGATGCATGTGTTGTAAGGAAGAACCCTCCCTCTTTGGGAAGAATGTTTCTGATTTACTCTTCCCTCAGAAGCAACACTCATGCCTTCAATCCTTTCCTGTTTGTGAAAATATGGCTGACAGTAATAGCATTTTTAAGGATGGGACAGATGCAGTTCATGACTTACTTCTTCATGAATCTTATATACAAGATCCTGATAATGATACTGAAAGACATCCAAACACCAGTGAAAGTAATCAGCCTTGTACTGGAACAAAAGAAACAAAATTTATCAATGGATTGAATTCTTTAGTCATGCCATGTTCAGAGATGAAAACTTACAAGATAGAGTCAGTTATTAATGACATATCAAGTAATAATTTCTTTAAAAATGATGATCATTTAGAGAATCAATGTGGGAGTGCTGTGTGGGACATATTCCGTAGGCAGGATGTACCCAAGCTAATGGAGTACCTAAAGAAACACCACAGAGAATTTCGCCACATAAATAGTCTTCCAGTTAATTCTGTGATTCATCCCATCCATGACCAGATCCTTTATTTAAATGAGAAGCATAAAAAGCAACTAAAGCAAGAGTATGGTGTTGAACCGTGGACGTTTGAGCAACACCTTGGGGAGGCTGTCTTTATACCTGCAGGATGCCCACATCAAGTGAGAAACAGAAAGTCTTGCATAAAAGTGGCTCTGGACTTTGTTTCACCTGAGAATGTTCAGGAATGCATTCGATTGACAGAGGAATTTCGATTACTTCCAAAAGACCATAGATCTAAGGAAGACAAATTGGAGATAAAGAAGATGGCACTCTATGCAACTGATTTTGCTATAACTGAAGCCACCAAACTGATGGAAGGAGAATGA 6219 0.4116 MDEPGEEFRRCSRSGTGGWRCKERAVSGRSLCEKHHLYTLQRNKKLKEGASGGVGVNQRKRGKKRKAEDDSENGVVGGVIDEGRREWFGDHNGGPNVVEEFAGLFGEAEGNGGENVSLGYGSFNPWHQGEGQQINVGEFGEGCGNLGQVLDDGLQFEGGYAEDMNGVAGLGQPWSIAGVCGNAGGVSDAGQEDHGNGASGDVCENGLLGLPSEGIEGLIGDAALDSLYDRGFQALLCQDRGFEEDVIFIGDGTGFQGLSGENAYEFCEVAGCEENPGQYGKFEVENVGSIELPVSNNKMTALGVEEGMELLLSGGVAADEEARGEALRPLAKRGQPKGAKNMNKQLSIALDGQTVGGNDNAGTIGMSSVRDLETERSVFSDEKDKVGDEDAGPGEIARPKKCGKPKGPKNKMGSVVHVSNEVAIKIAGQKMHCRPKASKCSKNIEVSDQVAGEIAGPKKHGRPKGSINKQKNTVEVSNDAAGDGEIAGPKKRGRPKGSKNKQKNTVEVSGDAAGDGEIAEPKKCGRPKGSKNKQKNTVEVSNDAAGDGEIAGPKKRGRPKGSKNKQKNTVEVSNEVADTGNGEITRPKKRGRPKGSTEKKRGRPKDSTKKRKTAVCTASNDGTGEIARQGSGNKMLNILCQKGEDEFASLTNKLGPAMCTRNKFKCSVFEGQNYPGMLSDIHLDDGGVTNVWPSGLESTILTPLCEQEKGMPSKATEDIENKMEITQPIIKRGRPKGTGNKKVKLPDQDMAEVMFTDKGSDIFFGPMGLGNFATCAVGEENIDHESDTIDPIDLKNYKATLVCDRNQEMPIQTFGQDEVQNDSDYDKPKRGRPKGSKNKKKNIAGEAASKFVKGGKMRGRPKGSNRKEKDSGYPLDSQIERHGIVAENDGRTSAESSSRNDIDLQKGNHSQERGLRITRHTIEHSQSRRLEGHTPTDVAIEDENEPMKVIHRSRMNVTGQPLQNQKSTRFSKVLSRIVPQKHIQEECISMLEDKVNKKKKLNFLVDCSNDSGNEKMTKGLTCEFGIVQKRSSERLRTLLIEGKNFQGVGVEETTDPGLESSGLMGDTGRKKDPRTLRCHQCWQNGRNGVVICAKCKRKQYCYVCITKWYPDKTREEIETACPFCLGICNCRLCLKKDVSVVYPQTESGEADTDVKLQKLLYLLSKTLPLLQHIQQEQRSELEIEASIHGSLLVEEDILQSVIDDDDRVYCDNCNTSIVNFHRSCPNPYCRYDLCLTCCMELRNGLHCEDISASDNEETVDTPSVTSWRAEINGRIPCPPKARGGCGTAILSLRRLFEANWVDKLIRNMEKLTIKYQPPIVDLSVGCLECNSLEDDGTQYSVRKAASRETSHDNFLYCPDAVEMGDTKFEHFQRHWIRGEPVIVRNVFEKASGLSWHPMVMWRAFRGAQKIMKEEATTFKAIDCLDWCEVKMNIFQFFKGYLEGRRYRNGWPAMLKLKDWPPSNSFEECFPRHGAEFTAMLPFSDYTHPKSGILNLATKLPAVLKPDLGPKTYIAYGSLEELSRGDSVTKLHCDISDAVNILTHTADVKTPPWQPRIIKKLQKKYEAEDLRELYGMNDKVVGSHGRKQKKCRVGNSMDPKIHEKEEIIGRDSTLLGSRGKEENVNGQLSRLQSLGKSRSDRAACVQGFSESTISKSLLNSGEQAILNLNTGFPEFNLNNHDSSCLFPGKDCEWTHYKVNNGEKWCSSPGDESCIGTSLPERMEFRTCTDEDFEKGRMFDMHLSKENFCSLQDQSDTGSLFVDLNFPTPPDRVNQEHQKNCIEQSQSKSRCMCCKEEPSLFGKNVSDLLFPQKQHSCLQSFPVCENMADSNSIFKDGTDAVHDLLLHESYIQDPDNDTERHPNTSESNQPCTGTKETKFINGLNSLVMPCSEMKTYKIESVINDISSNNFFKNDDHLENQCGSAVWDIFRRQDVPKLMEYLKKHHREFRHINSLPVNSVIHPIHDQILYLNEKHKKQLKQEYGVEPWTFEQHLGEAVFIPAGCPHQVRNRKSCIKVALDFVSPENVQECIRLTEEFRLLPKDHRSKEDKLEIKKMALYATDFAITEATKLMEGE. 2073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02706 2072 MobiDBLite consensus disorder prediction 890 904 - -
Seca7g02706 2072 FunFam Transcription factor jumonji (JmjC) domain-containing protein 1857 2044 - -
Seca7g02706 2072 Pfam JmjC domain, hydroxylase 1914 2018 IPR003347 -
Seca7g02706 2072 MobiDBLite consensus disorder prediction 1 20 - -
Seca7g02706 2072 MobiDBLite consensus disorder prediction 592 608 - -
Seca7g02706 2072 MobiDBLite consensus disorder prediction 1851 1872 - -
Seca7g02706 2072 MobiDBLite consensus disorder prediction 811 910 - -
Seca7g02706 2072 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 814 2069 IPR045109 GO:0032454|GO:0033169
Seca7g02706 2072 MobiDBLite consensus disorder prediction 376 402 - -
Seca7g02706 2072 SMART cupin_9 1469 2035 IPR003347 -
Seca7g02706 2072 Pfam WRC 9 47 IPR014977 -
Seca7g02706 2072 MobiDBLite consensus disorder prediction 861 888 - -
Seca7g02706 2072 ProSiteProfiles WRC domain profile. 5 49 IPR014977 -
Seca7g02706 2072 MobiDBLite consensus disorder prediction 431 623 - -
Seca7g02706 2072 ProSiteProfiles JmjC domain profile. 1476 2035 IPR003347 -
Seca7g02706 2072 MobiDBLite consensus disorder prediction 566 580 - -
Seca7g02706 2072 SMART AT_hook_2 731 741 IPR017956 GO:0003677
Seca7g02706 2072 SMART AT_hook_2 489 501 IPR017956 GO:0003677
Seca7g02706 2072 SMART AT_hook_2 827 839 IPR017956 GO:0003677
Seca7g02706 2072 SMART AT_hook_2 521 533 IPR017956 GO:0003677
Seca7g02706 2072 SMART AT_hook_2 587 599 IPR017956 GO:0003677
Seca7g02706 2072 SMART AT_hook_2 855 867 IPR017956 GO:0003677
Seca7g02706 2072 SMART AT_hook_2 457 469 IPR017956 GO:0003677
Seca7g02706 2072 SMART AT_hook_2 553 565 IPR017956 GO:0003677
Seca7g02706 2072 MobiDBLite consensus disorder prediction 48 77 - -
Seca7g02706 2072 ProSiteProfiles Zinc finger RING-type profile. 1078 1124 IPR001841 -
Seca7g02706 2072 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 1075 1137 IPR018866 -
Seca7g02706 2072 SUPERFAMILY Clavaminate synthase-like 1367 2062 - -
Seca7g02706 2072 MobiDBLite consensus disorder prediction 376 413 - -
Seca7g02706 2072 Gene3D Cupin 1353 1597 - -
Seca7g02706 2072 Gene3D Cupin 1827 2044 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02706 Seca-Chr7 70656133 70674056 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Seca7g02706 JmjC 1e-18 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02706 K15601 - gsj:114384813 2197.16