Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02680 ATGATTTGCTATCGCAGTTCTCAGTTGAGGATGACAATAGTAGCATTGCTAATGGTGCTGCTTATGAAGCTTGGGAGTGCTCAGAATGGCCCATCCAATCAATGTCCCTTCCGTCTAACTTGTACACAGAATATGAAAATGCTTGAGCTGCCTGCAGTTCCCGTGCCTGTAAAACTCCTCGTCAGCGACATTAATTACAGATGGCAAACATTAAAAGCACATGACCCCGAAAATTGTCTTCCGCGACTCTTACTGAGGCTCAACTATTCATCATTTTATCCTTTCTCATATTCAGGTTATGGGCCACGGTACAATATTAGTTTCTTTGATTGTTCTTCAGTGGGGAAACGACATCTGAGAAACAAGTATCAAATACAAGACGATGCGCAAGATATGTTATCTTGCCCAATTTATGCTGCTGACGATTTCCAAAATATCATTGACCTGGACCTAGTATCCTGCACCAAACTGTTTGAGTTTGACCGCGTTTTGCCAGTACTAGCAGCTCATGTACAGAGGAACTCACTCTCACTGGGGTGGTCGGATACAAATTTTGATAGATCATGCTTTGACTGTAACCAGACTAAGAATAAACACAAGTCAAAGAAGAAGACTACATCCATTATTTTATCTGCAGGTGTAATTGTTGGTTCTACACTGCTGGCGCTTTTGCTAGCTGCAATCGTTCGAATATATCGCTATTTTCGGATGAAAGGCGAGGATCATGCTAGAGTCGAAAACTTTTTGAAGGACTACAGAGCTTCAAAGCCAACCAGATTCTCTTATGCTGATATCAAGAGAATTACACATCAATTCAAGGAAAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTATCCACTGAAATTCTGGTTGCTGTCAAGGTCCTCAACAACACAGAGGGAGATGGAACAGAGTTCATAAATGAAATGGGAACCATGGGCAAAATCCACCATGTCAATGTCGTTCGCTTGCTTGGCTTTTGCGCTGATGGATTTCATCGTGCTTTAGTTTATGACTTTTTCCAAAATGGTTCGCTGCAGAAATTCATTTCTCCACCCAACAACAAGGATAACTTTCTTGGATGGGAAAAGTTGCAACAAATTGCTCTGGGCATAGCCAAAGGAATTGAGTATCTCCACCAAGGTTGTGATCAAAGAATTCTTCACTTTGACATCAATCCTCATAACGTCTTGCTAGATGACACTTTCACACCCAAAATTTCAGACTTCGGATTGGCTAAGCTGTGCTCCAAAAATCGAAGCACTGTATCCATGACTGCAGCCAGGGGAACATTAGGCTACATGGCACCTGAAATGTTTTCTAGAAACTTTGGTAATGTGTCTTACAAGTCTGATATCTACAGTTATGGGATGTTGATGCTAGAGATGGTTGGAGGAAAAAAGAATGTTGAGACAAGTAAAGACAATTTCAAAGTTCTATATCCAGATTGGATACACAGTTTGCTTGATGGAGGAGCCATACATATCCCTATGGATGAAGAGGGAGATTTCAAAATTGCAAAGAAACTTGCTATTGTGGGACTTTGGTGTATCCAGTGGCATCCAGTGCATCGCCCTTCCATGAAAACTGTGATGCAAATGCTCCAAGGAGAGGGAGACAATTTCAAAGTTCCCAGAAACCCCTTCGAGCCTACAGCTTCAACAAGTACCAGCGCTAATACTGCTGCAGGGCGTCTCAATTTGGAGCTGGAAGTGATTCAAGAATTAGATTAG 1746 0.4181 MICYRSSQLRMTIVALLMVLLMKLGSAQNGPSNQCPFRLTCTQNMKMLELPAVPVPVKLLVSDINYRWQTLKAHDPENCLPRLLLRLNYSSFYPFSYSGYGPRYNISFFDCSSVGKRHLRNKYQIQDDAQDMLSCPIYAADDFQNIIDLDLVSCTKLFEFDRVLPVLAAHVQRNSLSLGWSDTNFDRSCFDCNQTKNKHKSKKKTTSIILSAGVIVGSTLLALLLAAIVRIYRYFRMKGEDHARVENFLKDYRASKPTRFSYADIKRITHQFKEKLGEGAHGAVYKGKLSTEILVAVKVLNNTEGDGTEFINEMGTMGKIHHVNVVRLLGFCADGFHRALVYDFFQNGSLQKFISPPNNKDNFLGWEKLQQIALGIAKGIEYLHQGCDQRILHFDINPHNVLLDDTFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEMFSRNFGNVSYKSDIYSYGMLMLEMVGGKKNVETSKDNFKVLYPDWIHSLLDGGAIHIPMDEEGDFKIAKKLAIVGLWCIQWHPVHRPSMKTVMQMLQGEGDNFKVPRNPFEPTASTSTSANTAAGRLNLELEVIQELD. 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02680 581 FunFam S-receptor-like serine/threonine-protein kinase 240 344 - -
Seca7g02680 581 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Seca7g02680 581 ProSiteProfiles Protein kinase domain profile. 270 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02680 581 Pfam Protein kinase domain 272 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02680 581 SUPERFAMILY Protein kinase-like (PK-like) 252 540 IPR011009 -
Seca7g02680 581 Gene3D Transferase(Phosphotransferase) domain 1 345 550 - -
Seca7g02680 581 PANTHER RUST RESISTANCE KINASE LR10-RELATED 241 558 IPR045874 GO:0004672
Seca7g02680 581 Gene3D Phosphorylase Kinase; domain 1 244 344 - -
Seca7g02680 581 FunFam PR5-like receptor kinase 345 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02680 Seca-Chr7 68339086 68342082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02680 177 563 Receptor kinase-like Gene Family AT1G66910 41.912 6.75e-103 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Seca7g02680 Pkinase 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02680 - - tpra:123893290 766.918