Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g02680 | ATGATTTGCTATCGCAGTTCTCAGTTGAGGATGACAATAGTAGCATTGCTAATGGTGCTGCTTATGAAGCTTGGGAGTGCTCAGAATGGCCCATCCAATCAATGTCCCTTCCGTCTAACTTGTACACAGAATATGAAAATGCTTGAGCTGCCTGCAGTTCCCGTGCCTGTAAAACTCCTCGTCAGCGACATTAATTACAGATGGCAAACATTAAAAGCACATGACCCCGAAAATTGTCTTCCGCGACTCTTACTGAGGCTCAACTATTCATCATTTTATCCTTTCTCATATTCAGGTTATGGGCCACGGTACAATATTAGTTTCTTTGATTGTTCTTCAGTGGGGAAACGACATCTGAGAAACAAGTATCAAATACAAGACGATGCGCAAGATATGTTATCTTGCCCAATTTATGCTGCTGACGATTTCCAAAATATCATTGACCTGGACCTAGTATCCTGCACCAAACTGTTTGAGTTTGACCGCGTTTTGCCAGTACTAGCAGCTCATGTACAGAGGAACTCACTCTCACTGGGGTGGTCGGATACAAATTTTGATAGATCATGCTTTGACTGTAACCAGACTAAGAATAAACACAAGTCAAAGAAGAAGACTACATCCATTATTTTATCTGCAGGTGTAATTGTTGGTTCTACACTGCTGGCGCTTTTGCTAGCTGCAATCGTTCGAATATATCGCTATTTTCGGATGAAAGGCGAGGATCATGCTAGAGTCGAAAACTTTTTGAAGGACTACAGAGCTTCAAAGCCAACCAGATTCTCTTATGCTGATATCAAGAGAATTACACATCAATTCAAGGAAAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTATCCACTGAAATTCTGGTTGCTGTCAAGGTCCTCAACAACACAGAGGGAGATGGAACAGAGTTCATAAATGAAATGGGAACCATGGGCAAAATCCACCATGTCAATGTCGTTCGCTTGCTTGGCTTTTGCGCTGATGGATTTCATCGTGCTTTAGTTTATGACTTTTTCCAAAATGGTTCGCTGCAGAAATTCATTTCTCCACCCAACAACAAGGATAACTTTCTTGGATGGGAAAAGTTGCAACAAATTGCTCTGGGCATAGCCAAAGGAATTGAGTATCTCCACCAAGGTTGTGATCAAAGAATTCTTCACTTTGACATCAATCCTCATAACGTCTTGCTAGATGACACTTTCACACCCAAAATTTCAGACTTCGGATTGGCTAAGCTGTGCTCCAAAAATCGAAGCACTGTATCCATGACTGCAGCCAGGGGAACATTAGGCTACATGGCACCTGAAATGTTTTCTAGAAACTTTGGTAATGTGTCTTACAAGTCTGATATCTACAGTTATGGGATGTTGATGCTAGAGATGGTTGGAGGAAAAAAGAATGTTGAGACAAGTAAAGACAATTTCAAAGTTCTATATCCAGATTGGATACACAGTTTGCTTGATGGAGGAGCCATACATATCCCTATGGATGAAGAGGGAGATTTCAAAATTGCAAAGAAACTTGCTATTGTGGGACTTTGGTGTATCCAGTGGCATCCAGTGCATCGCCCTTCCATGAAAACTGTGATGCAAATGCTCCAAGGAGAGGGAGACAATTTCAAAGTTCCCAGAAACCCCTTCGAGCCTACAGCTTCAACAAGTACCAGCGCTAATACTGCTGCAGGGCGTCTCAATTTGGAGCTGGAAGTGATTCAAGAATTAGATTAG | 1746 | 0.4181 | MICYRSSQLRMTIVALLMVLLMKLGSAQNGPSNQCPFRLTCTQNMKMLELPAVPVPVKLLVSDINYRWQTLKAHDPENCLPRLLLRLNYSSFYPFSYSGYGPRYNISFFDCSSVGKRHLRNKYQIQDDAQDMLSCPIYAADDFQNIIDLDLVSCTKLFEFDRVLPVLAAHVQRNSLSLGWSDTNFDRSCFDCNQTKNKHKSKKKTTSIILSAGVIVGSTLLALLLAAIVRIYRYFRMKGEDHARVENFLKDYRASKPTRFSYADIKRITHQFKEKLGEGAHGAVYKGKLSTEILVAVKVLNNTEGDGTEFINEMGTMGKIHHVNVVRLLGFCADGFHRALVYDFFQNGSLQKFISPPNNKDNFLGWEKLQQIALGIAKGIEYLHQGCDQRILHFDINPHNVLLDDTFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEMFSRNFGNVSYKSDIYSYGMLMLEMVGGKKNVETSKDNFKVLYPDWIHSLLDGGAIHIPMDEEGDFKIAKKLAIVGLWCIQWHPVHRPSMKTVMQMLQGEGDNFKVPRNPFEPTASTSTSANTAAGRLNLELEVIQELD. | 582 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g02680 | 581 | FunFam | S-receptor-like serine/threonine-protein kinase | 240 | 344 | - | - | |
Seca7g02680 | 581 | ProSitePatterns | Protein kinases ATP-binding region signature. | 276 | 298 | IPR017441 | GO:0005524 | |
Seca7g02680 | 581 | ProSiteProfiles | Protein kinase domain profile. | 270 | 554 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g02680 | 581 | Pfam | Protein kinase domain | 272 | 537 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g02680 | 581 | SUPERFAMILY | Protein kinase-like (PK-like) | 252 | 540 | IPR011009 | - | |
Seca7g02680 | 581 | Gene3D | Transferase(Phosphotransferase) domain 1 | 345 | 550 | - | - | |
Seca7g02680 | 581 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 241 | 558 | IPR045874 | GO:0004672 | |
Seca7g02680 | 581 | Gene3D | Phosphorylase Kinase; domain 1 | 244 | 344 | - | - | |
Seca7g02680 | 581 | FunFam | PR5-like receptor kinase | 345 | 550 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g02680 | Seca-Chr7 | 68339086 | 68342082 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g02680 | 177 | 563 | Receptor kinase-like Gene Family | AT1G66910 | 41.912 | 6.75e-103 | 323 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Seca7g02680 | Pkinase | 5.5e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g02680 | - | - | tpra:123893290 | 766.918 |