Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02676 ATGGTCAGTTTTCAGAATTTTTCTCTTCTGTTAGCTGTTGTTTTCCTGTTATGGAAGCCTGTGATAGGCAAGAGTCCGTGCACAGATAAATGTGGACGCGTTCCCATTCAATTCCCCTTTTATCTCAGAAATAGCAAGTTAAATCACACCACCGGCAATCCTCGTGGGTTTGATCTATCATGTAACGATAGAGATGATACTGTGCTGGAGTTACCTGCTGTTCCGGTAAAACTGTTTGTCAAAGACATAGATTACCAATCTCAGCAAATTCAAATCTATGATCCTAGAAACTGTCTTTCCAGTCAGCTTTTTACCATCGGCAATTCATCAATTTCTCCCTTCCAATTCCAATTCCAGTCATTTGGAAGAAATAATAATGTTTCCTTCTTCCGTTGCGATTTAAAGTCATGTCCGATTTTGGCACTTTCATCTGGCGAAGACTTCATTGATCCTGAAATAGTTTCTTGCACCAAGGTGAGTGATGTTTTGTCCGTAGGGTGGAATAACATGATGGATGACAACAGTTTGATTATTGAATGGTCCAATCCTAACTGTAGTTACTGTGAAGCAAAAGGGCAGAAATGTAAATGGAAGAATGGTACCCAAGGTGAAACCGAATGCTTCGTTTGCTCAACAAACAAGATTTCAACATCAACTGTGTTACTCATTACTGCAGGGGCAATTGGTGGTTTGATGATTTTGACGCTATTGGTCATTGCATTGCTTCACATCTATCGCTATTTTAAGATGAAAGGAGAAGACTTTGCTAGGATTGAAAAATTCTTGGAGGATTATAGGGCAATGAAGCCTACAAGATTCACTTATTCTGATATTAAGAGAATCACAAATGGTTTCAAGGAGAGGTTAGGGGAAGGTGCTCATGGAGCAGTGTTCAAAGGCATGCTCTCCCAAGAAATTCTAGTTGCTGTAAAGGTACTCAATGAAACAGAGGGAGATGGGAAGGATTTTATAAATGAAGTGGGAACCATGGGAAAAATTCATCATGTCAATGTTGTTCGCTTGCTTGGTTTTTGCGCAGATGGATTCCACCGTGCTCTTGTCTATGATTTCTTTCCAAATGGTTCATTGCAGAAATTCTTAGCTCCACCAGACAATAAGGATGTGTTCCTTGGCTGGGAGAAGTTGCAACAGATTGCTGTTGGTGTTGCCAGGGGGATTGAGTATCTCCATCTTGGTTGTGATCATAGAATACTTCACTTTGACATCAATCCCCACAATGTGTTACTAGATGACCACTTCACCCCCAAAATTACTGATTTTGGACTTGCCAAATTGTGTCCCAAAAATCAGAGCACTGTATCTATGACTGCAGCCAGGGGAACCTTGGGTTACATTGCACCTGAAGTTTTCTCAAGAAACTTTGGTAATGTGTCTTATAAGTCTGACATTTACAGCTATGGAATGTTGCTGCTGGAGATGGTTGGTGGAAGAAAGAATACAAATGTGTCAGCTGAGGAAACTTTACAAGTTTTATACCCAGAATGGATCCATAACTTGCTTGAAGGTAAAGACATACAAGTTAATATTGAGGATGAGGGAGATGTTGCAATTGCAAAGAAACTTGCCATTGTAGGACTTTGGTGCATTCAATGGAATCCAGTGGACCGTCCGTCCATGAAAACTGTCGTACAAATGCTTCAAGGAGAGGGAGACAAGTTAATCCCACCCCCTACTCCTTTTGACTCAACTGGTGCTACTAGAACAAATGCAATTATTCCAGCTAGACATCTGAATTTCGAGTTGGAAGTTATTCCGGAAATAGAGTAA 1788 0.4055 MVSFQNFSLLLAVVFLLWKPVIGKSPCTDKCGRVPIQFPFYLRNSKLNHTTGNPRGFDLSCNDRDDTVLELPAVPVKLFVKDIDYQSQQIQIYDPRNCLSSQLFTIGNSSISPFQFQFQSFGRNNNVSFFRCDLKSCPILALSSGEDFIDPEIVSCTKVSDVLSVGWNNMMDDNSLIIEWSNPNCSYCEAKGQKCKWKNGTQGETECFVCSTNKISTSTVLLITAGAIGGLMILTLLVIALLHIYRYFKMKGEDFARIEKFLEDYRAMKPTRFTYSDIKRITNGFKERLGEGAHGAVFKGMLSQEILVAVKVLNETEGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQKFLAPPDNKDVFLGWEKLQQIAVGVARGIEYLHLGCDHRILHFDINPHNVLLDDHFTPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNVSAEETLQVLYPEWIHNLLEGKDIQVNIEDEGDVAIAKKLAIVGLWCIQWNPVDRPSMKTVVQMLQGEGDKLIPPPTPFDSTGATRTNAIIPARHLNFELEVIPEIE. 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02676 595 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Seca7g02676 595 Pfam Protein kinase domain 286 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02676 595 ProSiteProfiles Protein kinase domain profile. 283 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02676 595 FunFam PR5-like receptor kinase 358 562 - -
Seca7g02676 595 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Seca7g02676 595 Gene3D Transferase(Phosphotransferase) domain 1 358 560 - -
Seca7g02676 595 Gene3D Phosphorylase Kinase; domain 1 258 357 - -
Seca7g02676 595 PANTHER RUST RESISTANCE KINASE LR10-RELATED 254 569 IPR045874 GO:0004672
Seca7g02676 595 SUPERFAMILY Protein kinase-like (PK-like) 265 553 IPR011009 -
Seca7g02676 595 FunFam serine/threonine-protein kinase PBS1-like 254 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02676 Seca-Chr7 68258369 68260716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02676 182 566 Receptor kinase-like Gene Family AT1G66910 44.390 2.34e-103 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Seca7g02676 Pkinase 5.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02676 - - gmx:100819302 942.954