Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02670 ATGAAGAACCCCAAACGCCACCCGCCGGAGTCATCTCTCCGACGAGTGGCCTCCGACGAGAATGTCAAGGGTTTCAAGAATGCTCGCCGGAGGAGACTCAAAATCCGGCAAGTGAAGTACAGCTGCCAGGCGAAGATCCACGTTGGAAATGGCGCCGGCGGCAATGAGCAAAGGGAGATTCACGAAGCCGTGGAGATATCTCTATCGCTGGCGTCGTCATCGGAGGAGGAGGATCGGTCGTCGACGGGAAACGACGCTGTTTTGTCGTATGGTTCGGTGTCGGTGATAGGGAAGAGGAAGGAGATGGAGGACGCGGTGAGCGTAGAGATAGGGCTTGTTGCAAAAGAGAGAGCAAAGTGTGACTTCTTCGCCGTATACGACGGTCACGGCGGAGCTCAGGTGGCGCTAGCTTGCCGTGAGCGGTTGCACCAGCTTGTTGCAGAGGAGATGAAGAGGTGCGTGGATGAGGTGAAGTGGGACTGGGAGGAAATGATGGAAGGGTGTTTCCGTAAAATGGATAGTGAGGTGGCAGATAATGCGGCGGTGAGGACAGTCGGTTCCACGGCGGTTGTGGCTGTTGTAGCCGCGAAGGAGGTGGTCGTCGCTAATTGCGGCGACTCTAGGGCTGTGATGGGAAGAGGAGGTAAAGCCGTGGACTTGTCTAGTGATCATAAGCCCGACAGGCCTGATGAATTGATGCGAATCGAAGAAGCTGGTGGAAGGGTCATAAACTGGAATGGCCAGCGCGTTCTGGGTGTTCTTGCCACTTCGCGATCTATAGGTTAG 786 0.556 MKNPKRHPPESSLRRVASDENVKGFKNARRRRLKIRQVKYSCQAKIHVGNGAGGNEQREIHEAVEISLSLASSSEEEDRSSTGNDAVLSYGSVSVIGKRKEMEDAVSVEIGLVAKERAKCDFFAVYDGHGGAQVALACRERLHQLVAEEMKRCVDEVKWDWEEMMEGCFRKMDSEVADNAAVRTVGSTAVVAVVAAKEVVVANCGDSRAVMGRGGKAVDLSSDHKPDRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIG. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02670 261 CDD PP2Cc 89 261 IPR001932 -
Seca7g02670 261 ProSiteProfiles PPM-type phosphatase domain profile. 89 261 IPR001932 -
Seca7g02670 261 Pfam Protein phosphatase 2C 90 261 IPR001932 -
Seca7g02670 261 ProSitePatterns PPM-type phosphatase domain signature. 122 130 IPR000222 GO:0043169
Seca7g02670 261 Gene3D - 82 261 IPR036457 -
Seca7g02670 261 SUPERFAMILY PP2C-like 82 261 IPR036457 -
Seca7g02670 261 SMART PP2C_4 79 261 IPR001932 -
Seca7g02670 261 PANTHER PROTEIN PHOSPHATASE 73 261 IPR015655 GO:0004722|GO:0006470
Seca7g02670 261 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02670 Seca-Chr7 68013271 68016465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02670 90 261 PP2C-type Phosphatase Gene Family AT1G07430 51.832 1.83e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02670 K14497 - gmx:100807235 337.806