Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02669 ATGGATAACAGCAAACCCCCTTATGTAACTTTAACGCCAAACTTGAACGTGAAATCAAAACGATCACCATCGCCATCATCACTGTGTCCTATACCACAAGTTTCGACTACCACCTTAGACTTCGATTGCTTTAACCATGACATTAGTGAGTTGCCTAATAATTCTCTAAGAAATATAGGCCACAGGAACACCCAGTCCGAGATTCTCACCCTCCTTGATGATTTTAGCATCGACGATTATCTTTGCACCATGGATGGTCACTCACTCTCAGGTGGCACCATTGAGAAAGACTCGCTCTTCACCTACCTGAATGTGGATAAACTAAACCCATCCCCTGGTGCCCTTGCATCTGATGTAGACAACTTTTCTATTGCTATTGGCAGTACCAATATCAATGAAAGAGCTACCACAGATAACTTTGTTATTGCTAGTGGTACTACCAATATCAATGAAAGGCTTGACGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAAACCTGACATGTTGGTCCCTGCTTCTAAAAATGGATCTACTATTAACTCAAGAAAAGCAAAGTCTGCTATTGAGCTTGCGGAGCTTGCCTTTGTTGACCCCAAGCGTGCTAAAAGGATTTTGGCAAATAGAAAGTCTGCTATAAGATCAAAGGAAAATAAGGCACATTACATTTTAGAGCTTAAAAAGAAGGTGCAAACATTGGAAACTGAAAAGACATCCCTATCTACACAGTTAACTATCTTGCAAGTATGTCTTAACTCAACATTTGCATCTTATGTGTCTGTCAACTTGAGATTGTTGTTTACTAATTCATTTATTTTTTTACCTCTACCCTTGAACAATGCAAAAATAGAGGAAATTCAACATCTTGAAGTACAAGCTATGTAA 900 0.3911 MDNSKPPYVTLTPNLNVKSKRSPSPSSLCPIPQVSTTTLDFDCFNHDISELPNNSLRNIGHRNTQSEILTLLDDFSIDDYLCTMDGHSLSGGTIEKDSLFTYLNVDKLNPSPGALASDVDNFSIAIGSTNINERATTDNFVIASGTTNINERLDVGSQHSQFMNGSTSIIKPDMLVPASKNGSTINSRKAKSAIELAELAFVDPKRAKRILANRKSAIRSKENKAHYILELKKKVQTLETEKTSLSTQLTILQVCLNSTFASYVSVNLRLLFTNSFIFLPLPLNNAKIEEIQHLEVQAM. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02669 299 Gene3D - 204 258 - -
Seca7g02669 299 Coils Coil 228 248 - -
Seca7g02669 299 CDD bZIP_plant_RF2 206 253 IPR044759 GO:0003700|GO:0006355
Seca7g02669 299 SMART brlzneu 201 269 IPR004827 GO:0003700|GO:0006355
Seca7g02669 299 MobiDBLite consensus disorder prediction 1 29 - -
Seca7g02669 299 SUPERFAMILY Leucine zipper domain 205 254 IPR046347 GO:0003700|GO:0006355
Seca7g02669 299 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 203 253 IPR004827 GO:0003700|GO:0006355
Seca7g02669 299 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 22 253 - -
Seca7g02669 299 Pfam bZIP transcription factor 205 250 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02669 Seca-Chr7 68001638 68003960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02669 26 296 bZIP Transcription Factor Family AT1G06070 44.891 9.35e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g02669 bZIP_1 3.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02669 - - csav:115722920 206.068