Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02662 ATGGATAACAACAAACCCCCTTTTGTAACTTTAACGCCAAACTTGAACGTGAAATCAAAACGATCACCATCGCCATCATCACTGTGTCCTACACCACAAGTTTTGACTACCACCTTACACTTCGATTGCTTTAACCATGACATTAGTGAGTTGCCTAATAATTCTCTAAGAAATATAGGCCACAGGCACACCCAGTCTGAGATTCTCACCCTCCTTGATGATTTTAGCATTGACGATTATCTTGGCACCATGGATGGTCACTCACTCTCAGGTGGCACCATTGAGAAACACTCGCTCTTCACCTACATGAATGTGGATAAACTAAACCCATCCCCTGGTGCCCTTGCATCTGATGTAGACAACTTTTCTATTGCTATTGGTAGTACCAATATCAATGAAAGAACATATGTTGGGTCCCAACATAGCCTATTTATGAATGGTTCAACATCCATAATCAAACCTGATGTGTTGGTCTCTGCTTATGAAAATGGATCTACTATTAACTTGAAACAAGCAGTGTCTCCTTTTTCAATTGGTACTTGCATCGAGGATGATCTTGGTACCATGGGTGGTTACTCACTTTATGATGATACCACCGAGAATGACTTGCTCTCCACCTTCTTCAATATGCATAAACCAAACCCATCCTCTGGTGCTCCTGCAGCTACCACAGATAACTTTGTTGTTGCTAGTGGTACTACCAATATCAATGAAAGGCTTGATGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATAACCTCTGACATATTGGTATCTGCTTCTGAAAATGGCTCTACTATGAACTCAAGAAAAGCAATGTTTGCTTCTTCTATTGGTACTTGCATCAACGATGAACTTGGCACCATGGATAGTCACTCACTCTCTAGTGGCACCATTGATGACCACTTGCTCTCCACCTACCTCAATATGGATAAAATAAACCCATCCTCTTGTGCCCTTGCATCTGCTGCAGATAACTTTTCTATTGCTAGCAGTACTACCAATATCAATGAAAGGCTTGACATTGGGTCCCAAGATAGCCAGTTTATGAATGGTTCAACGTCCATAATCAAACCGGACATGATTGTCTCTGCTTTTGAAAATGGCTCTGCTATTAACTCAAAACAAACAACGCCTGCTTTTTCTATTGGTACTTGGATCGATGATGATCTTGGTACCATGGATGGTCACTCACTCTATAATGGTACCACTAACAAGGATGTGCTCTCCACTTACCTCAATATAGATAAACTAAATCCATCCTCTGGTGCTCCTACATCTACTGCAGACAACTTTGCTATTGCTAGTGGTACTACCAATATCAATGAAAGGCTTGACGTTGGGTCCCAACATAGACAATTTATGAATGGTTCAACATCCATCATCAAACCTGACATGTTGGTCTCTGCTTCTGAAAATGGATCTACTATTAACTCAAGAAAAGCAAAGTCTGCTACTGAGCTTGCGGAGCTTGCCTTTGTTGACCCCAAGCGTGCTAAAAGGATTTTGGCAAATAGACAGTCTGCTATAAGATCGAAGGAAAATAAGGCGCATTACTTTTTGGAGCTAGAAAAGAAGGTGCAAACATTGGAAACTGAAAATACATCCCTATCTACACAGTTAACTATCTTGCAAAGGGATACTCAAAGAAAGTATGATGAGAATAATGAGTTAGGGTTGGGGTTGCTAACTCTGATACAACAACTTCAATTGGATGACGGTGAGTTCGGGCTGCTATAA 1755 0.4091 MDNNKPPFVTLTPNLNVKSKRSPSPSSLCPTPQVLTTTLHFDCFNHDISELPNNSLRNIGHRHTQSEILTLLDDFSIDDYLGTMDGHSLSGGTIEKHSLFTYMNVDKLNPSPGALASDVDNFSIAIGSTNINERTYVGSQHSLFMNGSTSIIKPDVLVSAYENGSTINLKQAVSPFSIGTCIEDDLGTMGGYSLYDDTTENDLLSTFFNMHKPNPSSGAPAATTDNFVVASGTTNINERLDVGSQHSQFMNGSTSIITSDILVSASENGSTMNSRKAMFASSIGTCINDELGTMDSHSLSSGTIDDHLLSTYLNMDKINPSSCALASAADNFSIASSTTNINERLDIGSQDSQFMNGSTSIIKPDMIVSAFENGSAINSKQTTPAFSIGTWIDDDLGTMDGHSLYNGTTNKDVLSTYLNIDKLNPSSGAPTSTADNFAIASGTTNINERLDVGSQHRQFMNGSTSIIKPDMLVSASENGSTINSRKAKSATELAELAFVDPKRAKRILANRQSAIRSKENKAHYFLELEKKVQTLETENTSLSTQLTILQRDTQRKYDENNELGLGLLTLIQQLQLDDGEFGLL. 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02662 584 CDD bZIP_plant_RF2 503 554 IPR044759 GO:0003700|GO:0006355
Seca7g02662 584 Coils Coil 525 552 - -
Seca7g02662 584 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 500 563 IPR004827 GO:0003700|GO:0006355
Seca7g02662 584 SMART brlzneu 498 562 IPR004827 GO:0003700|GO:0006355
Seca7g02662 584 SUPERFAMILY Leucine zipper domain 502 554 IPR046347 GO:0003700|GO:0006355
Seca7g02662 584 Gene3D - 501 558 - -
Seca7g02662 584 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 28 578 - -
Seca7g02662 584 Pfam bZIP transcription factor 502 556 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02662 Seca-Chr7 67881720 67883910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02662 392 579 bZIP Transcription Factor Family AT1G06070 49.020 7.61e-45 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g02662 bZIP_1 2.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02662 - - gmx:100786738 158.688