Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02646 ATGGAGTGCAACAGAGATGAGGCAGCTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATACTGGTGCAAAAAGGTTTGCTCTCAAGGCTTTGAGTCTGTATCCTGCGCTGGAGGGTCTTTCCCAGTTTTTAACCACTGTTGATGTTTATATCTCTGCTGAGAATAAAATAAATGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGTCCCTTTGCTGATGATGAGATAGTTAGAAAGCAGTACAGGAAGTTGGCTCTCACTCTTCATCCTGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTTGTTTCAGAGGCATGGAGTTTACTATCAGATAAGGTCAAGAGACTAGCATATAACCAGAATAGGAGTTCAGAAGGTTTTCAGCATTATGCTCCCAACCATGTCGGGTCTCGATCAGAAGCACCCAGTTCAAATGTTTTTTATAATCTTAAGAAGAATGCAACTTCAAATGAGAGAACTGGAAATAATAATGTGCAGCCACCTGCAACCTCCATTCCTCCACATAATATGGCTGGTACCTTTTGGACTATCTGTAATCGATGCAGGACACATTATGAGTATCTCAGGGTTTATTTGAATCACACCCTTTTATGTCTCAATTGTAATGATGCTTTTGTGGCCATAGAGAAGGGTCCACCTCCTGTCAAGTCATCTAAATGGGCTCCTCGGCAACATCATCAGAAGTCACAACATCATGCTGGAAGGAATCACCCTATGAATCCAGGAAGAACATGTGCAGCTTCTCAAAACACAGATTCTTTTAATAATACAAACTTCCAGTGGGGTCCTCACTCAAGAATGGCTGGTTTTGTTAGCACAGATGAACCATCATCTGTTGCTGCTGCAAGTGTTAAGCAGCAGGCAAGTGAGAAAAGAAGAGAATCTGAGGGAGCCCCATCAATTGCTGCATGGGAGAGGAGTCGCATGTATAAGAGATCTGATGGTTCTTTTAGTGATGTTGGAAATCCTATGAAGAAAATAAAGAAAGATGATATTTACATGAACAGGGTAAATCATATGACCATGGGAAATGGAGCAACTGGTTTGGGAAGTTTCTATGAATCAAGAAAGGCCAACATAGGAACAGAAAAGACTTGTGGTTTTTCAGGTGTTACTAGCAAGCACTGCAGCATAAGAGAGTTGTCAGTGTCTGAATTACGAAAGATGTTGATCAGTAAGGCACAGATCGAAATTCGCAAGAAACTTGAAGATTGGAGATCAATGGCTGAAGCTAAGGTTACAAACAAGGACAAAGGAAATGAGACGCAGAAAAGCACATTTAATGACAAAACAACTGGTCCAGAGAAGCATGGAGGTTCCATTATAAATGGTAACAGGCATGTGGACAGTGATTCTATCCCAGTCACATCTGATGACATGGTAAAGGATAGGAGCCAATCCTATGTTACAATCAATGTTCCAGATTCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAAATTCCTTTGAGGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTGATCTCCACAAAGCCATTCAGAATGCGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTACAAAACTTGTGGGGATTTCAGGACTGGTAAGCATGAAATAACTGAATCATTAAATTCATTTTCACATAAGGTAAGGTGGACAAAAGGCACCAGAGGAGTTGTTCGCATCTTTCCTGGAAAGGGGGAAGTCTGGGCGCTCTATAAAAACTGGTCTCCTGATTGGAATGAAAATACTCCAGATGAAGTGATACACAAGTATGACATGGTGGAGGTGCTTGAAGATTTCAATGAGGAGGAAGGTGTGTTAGTTGCACCACTTGTCAAGGTTGATGGTTTTAAGACAGTGTTTCACAGGGACAGCCATGTTCAGGTAAGGAGTATTCCAAAAGTGGAGATGTTTCGCTTCTCTCATCAGGTTCCTAACTACTTGCTTACGGGACAAGAAGCTCATAATGCTCCAAAGGGCTGTAGAGAGTTGGATCCTGCAGCTACTCCTTTAGATCTTCAGACAACAACAGAATCAAATGAGGCATTGGATAATGTTGGAAAATCTAAGGAAGACATATTGCCCATTTCACCTGAAAACCATGCATCTGGTAAGGCAGAGAATGCTTCAAAACCTTGTAGAACAGATATGTTAGATGAGGCTGGTAAACAGAGAAAGGACGATAGATTACAGTCCACAGTATAG 2316 0.4149 MECNRDEAARAKEIAERKFSEREYTGAKRFALKALSLYPALEGLSQFLTTVDVYISAENKINGEMDWYGILGVSPFADDEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKVKRLAYNQNRSSEGFQHYAPNHVGSRSEAPSSNVFYNLKKNATSNERTGNNNVQPPATSIPPHNMAGTFWTICNRCRTHYEYLRVYLNHTLLCLNCNDAFVAIEKGPPPVKSSKWAPRQHHQKSQHHAGRNHPMNPGRTCAASQNTDSFNNTNFQWGPHSRMAGFVSTDEPSSVAAASVKQQASEKRRESEGAPSIAAWERSRMYKRSDGSFSDVGNPMKKIKKDDIYMNRVNHMTMGNGATGLGSFYESRKANIGTEKTCGFSGVTSKHCSIRELSVSELRKMLISKAQIEIRKKLEDWRSMAEAKVTNKDKGNETQKSTFNDKTTGPEKHGGSIINGNRHVDSDSIPVTSDDMVKDRSQSYVTINVPDSDFHNFDLDRAENSFEEDQVWAAYDDDDGMPRYYARIHKVISTKPFRMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEITESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYKNWSPDWNENTPDEVIHKYDMVEVLEDFNEEEGVLVAPLVKVDGFKTVFHRDSHVQVRSIPKVEMFRFSHQVPNYLLTGQEAHNAPKGCRELDPAATPLDLQTTTESNEALDNVGKSKEDILPISPENHASGKAENASKPCRTDMLDEAGKQRKDDRLQSTV. 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02646 771 MobiDBLite consensus disorder prediction 229 274 - -
Seca7g02646 771 MobiDBLite consensus disorder prediction 710 771 - -
Seca7g02646 771 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Seca7g02646 771 MobiDBLite consensus disorder prediction 428 472 - -
Seca7g02646 771 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Seca7g02646 771 Pfam DnaJ domain 66 127 IPR001623 -
Seca7g02646 771 Pfam Domain of unknown function (DUF3444) 485 690 IPR024593 -
Seca7g02646 771 Gene3D DnaJ domain 63 172 IPR036869 -
Seca7g02646 771 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Seca7g02646 771 MobiDBLite consensus disorder prediction 257 274 - -
Seca7g02646 771 MobiDBLite consensus disorder prediction 293 315 - -
Seca7g02646 771 PANTHER BNAC03G44070D PROTEIN 1 707 - -
Seca7g02646 771 SMART dnaj_3 65 122 IPR001623 -
Seca7g02646 771 PRINTS DnaJ domain signature 86 101 IPR001623 -
Seca7g02646 771 PRINTS DnaJ domain signature 102 122 IPR001623 -
Seca7g02646 771 PRINTS DnaJ domain signature 68 86 IPR001623 -
Seca7g02646 771 MobiDBLite consensus disorder prediction 749 771 - -
Seca7g02646 771 CDD DnaJ 66 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02646 Seca-Chr7 67517352 67520849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02646 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.766 1.98e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02646 - - gmx:100792212 1170.99