Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02622 ATGGAGTGCAATAAGGATGAGGCTACCAGGGCTAAAGAAATTGCTGAGAGGAAGTTTATTGCAAAGGATACTTTGAGTACAAAGAAGTTTGCTTTGAAAGCCCAAAATTTATTTCCTGCCCTTGAGGGTATTCCTCAAATGATATCAACCCTTGATGTGTATATTTCTGCTGAGAATAAAATAAATGGAGAAGCAGATTGGTATGGTATACTTGGTGTGGACCCCCTCGCCGATGATGATACAGTGAGGAAACAATACAGGAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAGTCCATTGGAGCTGATGGGGCCTTTAAACTTATTTCAGAGGCATGGAGTTTACTATCAGATAAGGCTAAAAGGGAAGCTTATGATGAGAAGAGAAATGGAAAAGCACGTAAAGGTTCAACTCTATTTGGAGGTTCAGCAAAAACAGGGGCTAATGGCAGTTACAATTTTACTAAGACTGCCCCTTCAAGTGCAAGGACTCCAAAGAACACTACTGCTAAGGAAAACACTTCATCTTCTACACATAAGTCAAAACCTACATTTTGGACTGCTTGCCATAATTGA 579 0.4059 MECNKDEATRAKEIAERKFIAKDTLSTKKFALKAQNLFPALEGIPQMISTLDVYISAENKINGEADWYGILGVDPLADDDTVRKQYRKLALMLHPDKNKSIGADGAFKLISEAWSLLSDKAKREAYDEKRNGKARKGSTLFGGSAKTGANGSYNFTKTAPSSARTPKNTTAKENTSSSTHKSKPTFWTACHN. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02622 192 MobiDBLite consensus disorder prediction 149 192 - -
Seca7g02622 192 Gene3D DnaJ domain 63 183 IPR036869 -
Seca7g02622 192 SMART dnaj_3 65 122 IPR001623 -
Seca7g02622 192 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Seca7g02622 192 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Seca7g02622 192 PANTHER BNAC03G44070D PROTEIN 1 191 - -
Seca7g02622 192 CDD DnaJ 66 119 IPR001623 -
Seca7g02622 192 PRINTS DnaJ domain signature 68 86 IPR001623 -
Seca7g02622 192 PRINTS DnaJ domain signature 86 101 IPR001623 -
Seca7g02622 192 PRINTS DnaJ domain signature 122 141 IPR001623 -
Seca7g02622 192 PRINTS DnaJ domain signature 102 122 IPR001623 -
Seca7g02622 192 Pfam DnaJ domain 66 127 IPR001623 -
Seca7g02622 192 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Seca7g02622 192 MobiDBLite consensus disorder prediction 149 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02622 Seca-Chr7 65980239 65980817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02622 4 131 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 41.045 5.56e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02622 - - lja:Lj2g3v0520120.1 331.257