Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02613 ATGGGAGATTGGAATCAGAAAAACCTCATACATGAGCTACTACAGGGCATGGAGCTAGCAAAGCAACTCCAAATCTCTCTCCACGTGTCTTCTATGCCCCAAGAAAGCCGCGAGCTTCTGATCCAGGAGATCTTAGCCGCATTTGAAAAGGCACTTCAATTGGCGAATTTTAATGTTGGGCTAGTGGGTGAGCCTTCACAAATGCCCTCAAGGGTTGCAATTCAAGGATCAAAGTCACCACCTTTAAGTGGAAGCCCTCCAAGTGAAGACTCAGACAGAGATCTGATGGACTTGGAGCTGAGTGGCTCTAGAAAGAGGAAAACTATACCAAGATGGGCAAAAAAGATTCGAGTTAATCCAGGGATGGGAGTGGAAGGGTCTCTTGATGATGGATATAGTTGGAGAAAATATGCTCAGAAAGACATTCTTGGAGCCAAGTTCCCAAGAGGCTATTATAGATGCACCCACAGAAATGTTCAAGGCTGCATGGCCACAAAGCAAGTGCAAAGATCAGATGAAGACCCAACTGTCTTTGAGATCAATTACAGGGGAAAGCACACCTGCACAATGGCCGTCGATGTGGTACCCGATCCATCACAACCACAAGATAAAGAAGAAGAGACTAATTTGAAGACCACAGGTCCAGAGCAACAATATGACCAACAAAGTCTTGAGCAGCAATCAAGTGATCTTCTTTTGAACCTCCGTACAGAGCTAAGGGTCCAAACAGGGAACTTAGATCATGACCATCATACCCCTCACCAATCATTTGCTTCATTCCATTTCCCTTCAACTTCAAATATAAAAACTGAAGAGCAAGTTTTCCCTTCCCCAATGATTGACAACAACTTTGCAGAAAACTTTAGCTATCCTTCTTATGTGTCGCCTGCCACATCTGGAACAAACTTTTTTGTGTCTCCGAGTGGGGGGAACAGCTTTAAGGAGCCCCCAAATGTGGCAAGTTCTGGGTTTGAGATCAATGACACGATCTCATCACCTGCAAACTCTCTAACCGTTGGCTTGGAGTTTCCATTTGATCATGATTTTCCATTAGACGGCCAACACTTCACTTTCAATAACCCACGATTCTCCTAA 1095 0.4447 MGDWNQKNLIHELLQGMELAKQLQISLHVSSMPQESRELLIQEILAAFEKALQLANFNVGLVGEPSQMPSRVAIQGSKSPPLSGSPPSEDSDRDLMDLELSGSRKRKTIPRWAKKIRVNPGMGVEGSLDDGYSWRKYAQKDILGAKFPRGYYRCTHRNVQGCMATKQVQRSDEDPTVFEINYRGKHTCTMAVDVVPDPSQPQDKEEETNLKTTGPEQQYDQQSLEQQSSDLLLNLRTELRVQTGNLDHDHHTPHQSFASFHFPSTSNIKTEEQVFPSPMIDNNFAENFSYPSYVSPATSGTNFFVSPSGGNSFKEPPNVASSGFEINDTISSPANSLTVGLEFPFDHDFPLDGQHFTFNNPRFS. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02613 364 SUPERFAMILY WRKY DNA-binding domain 127 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g02613 364 MobiDBLite consensus disorder prediction 71 86 - -
Seca7g02613 364 Gene3D WRKY domain 122 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g02613 364 ProSiteProfiles WRKY domain profile. 123 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g02613 364 MobiDBLite consensus disorder prediction 193 223 - -
Seca7g02613 364 MobiDBLite consensus disorder prediction 71 94 - -
Seca7g02613 364 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g02613 364 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 291 IPR044810 GO:0003700
Seca7g02613 364 FunFam WRKY transcription factor 53 114 191 - -
Seca7g02613 364 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02613 Seca-Chr7 65689504 65691571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02613 1 265 WRKY Transcription Factor Family AT4G23810 39.310 3.54e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g02613 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02613 - - gmx:100776906 390.963