Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02607 ATGAAGCATTCCACCCGTGAAGGATTTTGTCGCTGTCTTTGTGAACCCGTGCGCAACAGTCCGCCACCGCGTCGTGAAGAGGGGCAATTTTATGCAGCTTTAAACACTCTGGAAGATGGGCTACTTCACACAACATGTGGTACACCAAATTATATTGGCCCTGAGATGATCCAGGACAAAGGCTATGATGGTGTAAAGGTTGATCTCTGGTCATGTGGTGTTATTCTTTTTATTTTAATGGTCGGCTATTTTCCCTTTGAAGATAACAATCTTTATGGTTTTATATAA 288 0.4236 MKHSTREGFCRCLCEPVRNSPPPRREEGQFYAALNTLEDGLLHTTCGTPNYIGPEMIQDKGYDGVKVDLWSCGVILFILMVGYFPFEDNNLYGFI. 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02607 95 Gene3D Transferase(Phosphotransferase) domain 1 29 95 - -
Seca7g02607 95 Pfam Protein kinase domain 42 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02607 95 SUPERFAMILY Protein kinase-like (PK-like) 36 93 IPR011009 -
Seca7g02607 95 ProSiteProfiles Protein kinase domain profile. 1 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02607 95 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 34 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02607 Seca-Chr7 65572421 65574742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02607 38 91 CBL-interacting serine-threonine protein kinases AT1G30270 79.630 4.72e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Seca7g02607 Pkinase 3.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02607 - - ahf:112734784 105.916