Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02581 ATGGCGTTAGAAGTGCTAGAGGCCCTTGATTCAGCACGCACGCAATGGTACCACGTAACAGCCATAGTAATCGCAGGCATGGGGTTCTTCACCGACGCCTACGACCTCTTCTGCATCACCACCGTTTCAAAGCTCTTAGGACGCTTGTACTACTTCGACCCACACACAGGCAAACCAGGGAAGCTCCCACTCCCAGTCAACAACTTCGTCACAGGCGTCGCCCTCGTGGGAACACTTTCAGGCCAATTAGTCTTCGGCTGGTTGGGTGACAAACTAGGACGCAAAAAAGTCTACGGTATCACTCTCATTCTCATGGTCTTCTGCGCCATATGCTCAGGCCTCTCATTCGGCTCAACCGCCAAGTCCGTTATGGGAACCTTATGCTTCTTCAGATTCTGGCTCGGCTTCGGTATCGGTGGTGACTACCCTTTATCCGCCACCATCATGTCAGAATACGCTAACAAAAGGACACGTGGCGCTTTCATAGCTGCCGTCTTCGCTATGCAAGGCGTGGGAATCATCTTCGCTGGGTTAGTTTCAATGATCCTCTCAGCTTGGTTTAAATCCTCCTACGACGCTCCTAACTTCCATACTAACGCGGTCTTGTCAACACAACCCGAGGGTGACCTCTTGTGGCGGTTGGTTCTCATGATTGGAGCCGTCCCAGCAGCATTGACATATTACTGGCGGAACGCGAAACAAGCAGCTGCTGACATGGCAAGGGTTTTGGATATTGAGATCCAAGCTGAGCAGGACAAATTGGCTGACTTCAAAGCAGCGAATAATTACCCTCTTTGGTCCAATGAGTTCTTTGAGAGACACGGTCGTCACTTGATTGGGACAATGAGCTCGTGGTTCTTGTTAGACATTGCTTTCTACAGCCAGAACCTGACGCAGAAGGATATATTCCCGGCGATTGGACTCATCGACAATGAACAACAAATGAATGCTATTGATGAAGTGTTCCAGACGTCACGTGCAATGTTCGTGATTGCCTTGTTTGGAACTTTCCCTGGTTACTGGTTCACTGTTGCCTTCATTGAGAAGCTTGGACGGTACAAGATTCAGCTCATTGGCTTCTTCATGATGTCCTTCTTCATGTTCGTCATTGGTGTCAAGTATTATTATCTCAAGAATGAAAACCCGCACCTTTTTGCTCTTCTCTATGGGCTGACGTTCTTTTTTGCGAACTTCGGCCCAAACAGCACGACATTCGTGCTGCCTGCGGAGCTCTTCCCAACACGTGTGAGATCCACGTGTCATGCGCTCAGTGCGGCGGCAGGGAAGGCCGGTGCAATGGTTGGGGCGTTCGGGATACAGAACTACACACAGGGAGGGGATCAGAAGCAGATTAAGCACGCGATGATGATTCTTGCGGTGACCAACTTGATAGGGTTCTTCTGCTCTTTCTTGGTTACGGAAACAAAGGGAAGGTCGCTGGAGGAAATTTCGGGTGAGGATGGAAGAGAGAGTGAACTCACAGCTACACCAATGCCTGATAATAGGGTTGTGGCGCGTCAGGAATCGAGGACAGAGACAATGTGA 1545 0.499 MALEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCITTVSKLLGRLYYFDPHTGKPGKLPLPVNNFVTGVALVGTLSGQLVFGWLGDKLGRKKVYGITLILMVFCAICSGLSFGSTAKSVMGTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMILSAWFKSSYDAPNFHTNAVLSTQPEGDLLWRLVLMIGAVPAALTYYWRNAKQAAADMARVLDIEIQAEQDKLADFKAANNYPLWSNEFFERHGRHLIGTMSSWFLLDIAFYSQNLTQKDIFPAIGLIDNEQQMNAIDEVFQTSRAMFVIALFGTFPGYWFTVAFIEKLGRYKIQLIGFFMMSFFMFVIGVKYYYLKNENPHLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGAMVGAFGIQNYTQGGDQKQIKHAMMILAVTNLIGFFCSFLVTETKGRSLEEISGEDGRESELTATPMPDNRVVARQESRTETM. 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02581 514 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 18 481 - -
Seca7g02581 514 FunFam Inorganic phosphate transporter 1-6 17 496 - -
Seca7g02581 514 Pfam Sugar (and other) transporter 22 484 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca7g02581 514 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 477 IPR020846 GO:0022857
Seca7g02581 514 MobiDBLite consensus disorder prediction 482 514 - -
Seca7g02581 514 CDD MFS_PhT 22 476 - -
Seca7g02581 514 Gene3D MFS general substrate transporter like domains 17 498 IPR036259 -
Seca7g02581 514 SUPERFAMILY MFS general substrate transporter 8 484 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02581 Seca-Chr7 64765555 64767144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02581 3 486 Inorganic Solute Cotransporters AT5G43350 61.057 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02581 K08176 - gmx:100805284 862.448