Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02564 ATGTTTATTTTCGATTTCGTGAGTTTCGTCTTCGATCAATTGGTAGAAGTCAGTGAAGCATTTTTCATTTCCTTCAATTGCTGGTTCGTCTCTGCTCCGTCACAATCAGAGCAATTTGTTGAGCTGCGACCAGCATCGAAGTTTCTGTTCGCTGCAGGTTGTATCAGTCCACCAAAGATGGATAATCTGTATGAAGTTCCAATATATAATTTGGATGATGACAAAGATATGGGCAACGGTGTTGCTTCTAATGATAGTGTTAGTGGAGATTGTACTAATATGGTTGAAGAAAATGATAGTGGTAATAGAGAACCTAGTAATGTTGGAGATACCCATAATAATGATGAAAGAAATGAGGCACCAATGGTTGATGTTGGAGGTGATTTGTTTAAAAGGATAACAAAATTGACTAGTGATGATATACTAGGATTAGAGTTCGGATCTCAAAAGGAAGCATATGAATTTTACAATCAATATGCTAAAGCTCACGATTTTGTGATAAGGAAAGATGAGATAAAAAGGGATGTTAAGGGTAACATTGTAATGCGGCAGTTTGTATGCAACAGAGAAGGATTGAGGAACAAAAGGCATTTGATGAGGTTGGATCGAAAAAGGGATCATAGAGCAATTACTCGCACTAATTGTGAAGCTAAATTACGAATTCGCTTCAATCGAAAGAAAACAAATTGGAGAGTGGTGTCGTTTGAGGAGTCTCATAACCATGAGCTAACCCCACCTAGGTTTGTGCATTTACATTCTGCATATCGTAAGTTGACAGAGGGAGATAAGGCTCAAGTGGATAGCTTACATTCTCATGGTGTGAGAACGTGTCACATTATGGGTTACATGTTGGCTCAAAAAGGGGGGTACAGTAATGTAGGGTTTGCAAGAAAGGATGTGTACAATTATATAGACAGCAATAATCGTGTAAAGATAAAAGATGGAGATGCACTTGCTGCATTAAGTTATTTGAAAGGCAGGGCAGCACATGATCCCACACTGTTTGCAGAATTTAGGGCTGATGACAAAGGTAAATTGAAGCATCTTTTTTGGGCGGATGGGATGAGCATATCTGATTTTCATTGTTTTGGGGATGTTGTTGCATTTGATACAACATATAGGAAGAATAGGTACAATTATCCATTGGTAATATTTTCTGGGTGCAATCACCATTCCCAAACATCTATTTTTGGGTGTGCTTTGGTTTCTGATGAAACTACTGCAACATATAAATGGGTTTTAGAAGCTTTTTTGATTGCAATGGGAAACAAACACCCAAAAGCAGTTGTTACTGATGGTGATGCTGCCATGAGGGAGGCCATAAAGCAAGTCTTTCCGGATTCATGCCATCGGTTGTGTGCGTGGCACTTGCATAATAATGCTTGTGAAAATGTTAAATGTGGTCCTTTTTTGGAAGATTTTAAAACGACAATGTATTCAAATTTTACCAAGGAAGAGTTTGAAGATTTTTGGAAGAAGATAGTTGATAAACATGGACTTTTGGGGAACAAATGGGTTTCCAAGACATATGAGAACAGGTCATTATGGGCAACAACATATCTTCGTGACAAATTCTTTGGTCGGATAAGGACCACCTCACAATGTGAAGCAATCAATGCAATTGTGAAGACATATGTTAAGAAAAACAGTTCTATTATTGAATTCATGCATAAATTTGAGCAAGCATTGAGGGAGTACAGGAACAATGAATTGAGTGCTGATTTTAAGTCCTTATTTTCAGAACCAGTCTTGACTACTTGCCTGCACAAATTTGAGAAAGAAGCTGCAAAAATTTATACACTAGAGATATTTAAAGAAGTTCGGCAGCAAATAGATAAGGCTGGAGCATTAATTGTTATTGATCGAGCAGTGAACAGGCAGAAGTTGACTTTCACACTAAATAGGTATTGTAACCCTGGTTGTGGACGTCATGTTTTGTATGATACTGTTGACTGTTCTTTCATTTGTGATTGTCGTTTGTTTGAAAGTCGTGGCATTCCATGCTCTCATATTTTTTGTGCAATGAAAAATGAGCATGTAGACTTTATTCCTAGCAGTTTGATTTTGAAACGTTGGACAAAGAATGCTAAAAGTGAACTAATTTCCTCTTATCGGGTTGATGAAGTTCATTCTGATGTGTTGTCTGCTGCCCGGATATCAGCCTTATCTGCCTATTGTAACAACTTTGTTAGGGTTGCTTATGAAAAGACTGGGTGTTTTGGTGAGATAGTCGATGACATTTTTAATCTTCAGTTGAAGTATGAGAAGAAGGGTGATCCAAGTAGCACATCCTCATCAGCAAGGAAGATTGGTGATCCCACTGTGGTTAAGACTAAAGGTGCTCCTAAAAAGAGTAAGTTTAGCAAGAAAAGAAAGAGACATTGTTCAAATTGCTCAGGCACAGGACACACAATTAGGACATGTCCTAGAGTTGGTGGTATAGATGTTAAGGCTGATATTGATGATGAGACTTCACCTTCAGAGAGGAGTGACAATAACAGATCAAATGACAGTGACAAAAATGAAATGGAATTTGATGTATCTAACACTCAAGTACCTGTACCTTCAGAAAATTCCAGTGGGAGAAACATTAAAAAAGGGAAGGAGAAGGTAGATCCTGTTAGCACCAGTAAGGTGAAAAAGGTGAAGGGGAAAAAGGAAAAAGACTCAAGTCAAAAACAGGCAAATGAAGTTGTAAGTAGACTACATTGA 2712 0.3791 MFIFDFVSFVFDQLVEVSEAFFISFNCWFVSAPSQSEQFVELRPASKFLFAAGCISPPKMDNLYEVPIYNLDDDKDMGNGVASNDSVSGDCTNMVEENDSGNREPSNVGDTHNNDERNEAPMVDVGGDLFKRITKLTSDDILGLEFGSQKEAYEFYNQYAKAHDFVIRKDEIKRDVKGNIVMRQFVCNREGLRNKRHLMRLDRKRDHRAITRTNCEAKLRIRFNRKKTNWRVVSFEESHNHELTPPRFVHLHSAYRKLTEGDKAQVDSLHSHGVRTCHIMGYMLAQKGGYSNVGFARKDVYNYIDSNNRVKIKDGDALAALSYLKGRAAHDPTLFAEFRADDKGKLKHLFWADGMSISDFHCFGDVVAFDTTYRKNRYNYPLVIFSGCNHHSQTSIFGCALVSDETTATYKWVLEAFLIAMGNKHPKAVVTDGDAAMREAIKQVFPDSCHRLCAWHLHNNACENVKCGPFLEDFKTTMYSNFTKEEFEDFWKKIVDKHGLLGNKWVSKTYENRSLWATTYLRDKFFGRIRTTSQCEAINAIVKTYVKKNSSIIEFMHKFEQALREYRNNELSADFKSLFSEPVLTTCLHKFEKEAAKIYTLEIFKEVRQQIDKAGALIVIDRAVNRQKLTFTLNRYCNPGCGRHVLYDTVDCSFICDCRLFESRGIPCSHIFCAMKNEHVDFIPSSLILKRWTKNAKSELISSYRVDEVHSDVLSAARISALSAYCNNFVRVAYEKTGCFGEIVDDIFNLQLKYEKKGDPSSTSSSARKIGDPTVVKTKGAPKKSKFSKKRKRHCSNCSGTGHTIRTCPRVGGIDVKADIDDETSPSERSDNNRSNDSDKNEMEFDVSNTQVPVPSENSSGRNIKKGKEKVDPVSTSKVKKVKGKKEKDSSQKQANEVVSRLH. 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02564 903 MobiDBLite consensus disorder prediction 845 861 - -
Seca7g02564 903 MobiDBLite consensus disorder prediction 757 771 - -
Seca7g02564 903 Pfam FAR1 DNA-binding domain 154 244 IPR004330 -
Seca7g02564 903 MobiDBLite consensus disorder prediction 818 903 - -
Seca7g02564 903 ProSiteProfiles Zinc finger SWIM-type profile. 648 679 IPR007527 GO:0008270
Seca7g02564 903 MobiDBLite consensus disorder prediction 757 802 - -
Seca7g02564 903 MobiDBLite consensus disorder prediction 818 844 - -
Seca7g02564 903 MobiDBLite consensus disorder prediction 82 108 - -
Seca7g02564 903 PANTHER OS01G0519700 PROTEIN 141 790 - -
Seca7g02564 903 Pfam MULE transposase domain 366 460 IPR018289 -
Seca7g02564 903 MobiDBLite consensus disorder prediction 82 122 - -
Seca7g02564 903 SMART 26again6 654 681 IPR006564 GO:0008270
Seca7g02564 903 MobiDBLite consensus disorder prediction 862 894 - -
Seca7g02564 903 MobiDBLite consensus disorder prediction 782 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02564 Seca-Chr7 64276670 64279984 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g02564 MULE 2.6e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02564 - - ccaj:109792835 949.888